(21 nodes) Cohesin Loading onto Chromatin network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cdca5	Cell division cycle associated 5. (260 aa)
	pds5a	PDS5 cohesin associated factor A. (1294 aa)
	LOC102301505	Stromal antigen 2a. (1276 aa)
	pds5b	PDS5 cohesin associated factor B. (1409 aa)
	wapl	WAPL cohesin release factor a. (1171 aa)
	LOC102310266	RAD21 cohesin complex component like 1. (547 aa)
	LOC102292095	Si:ch211-269e2.1. (1091 aa)
	LOC102289767	RAD21 cohesin complex component a. (636 aa)
	LOC102313370	WAPL cohesin release factor b. (1213 aa)
	stag1	Stromal antigen 1a. (1260 aa)
	LOC102304191	Structural maintenance of chromosomes protein. (1245 aa)
	RAD21	RAD21 cohesin complex component. (648 aa)
	LOC102307802	Stromal antigen 2b. (1249 aa)
	smc1a	Structural maintenance of chromosomes protein. (1231 aa)
	stag3	SCD domain-containing protein. (1191 aa)
	nipbl	Nipped-B protein. (2311 aa)
	esco2	Establishment of sister chromatid cohesion N-acetyltransferase 2. (664 aa)
	smc3	Structural maintenance of chromosomes protein. (1217 aa)
	LOC102311942	Nipped-B protein. (2530 aa)
	ENSHBUP00000034445	Uncharacterized protein. (104 aa)
	rec8	REC8 meiotic recombination protein b. (580 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000034445	LOC102289767	ENSHBUP00000034445	ENSHBUP00000010969	Uncharacterized protein.	RAD21 cohesin complex component a.	0.937
ENSHBUP00000034445	LOC102292095	ENSHBUP00000034445	ENSHBUP00000009631	Uncharacterized protein.	Si:ch211-269e2.1.	0.894
ENSHBUP00000034445	LOC102301505	ENSHBUP00000034445	ENSHBUP00000002341	Uncharacterized protein.	Stromal antigen 2a.	0.894
ENSHBUP00000034445	LOC102304191	ENSHBUP00000034445	ENSHBUP00000014526	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.958
ENSHBUP00000034445	LOC102307802	ENSHBUP00000034445	ENSHBUP00000022516	Uncharacterized protein.	Stromal antigen 2b.	0.894
ENSHBUP00000034445	LOC102310266	ENSHBUP00000034445	ENSHBUP00000009517	Uncharacterized protein.	RAD21 cohesin complex component like 1.	0.937
ENSHBUP00000034445	LOC102311942	ENSHBUP00000034445	ENSHBUP00000034425	Uncharacterized protein.	Nipped-B protein.	0.895
ENSHBUP00000034445	LOC102313370	ENSHBUP00000034445	ENSHBUP00000011423	Uncharacterized protein.	WAPL cohesin release factor b.	0.813
ENSHBUP00000034445	RAD21	ENSHBUP00000034445	ENSHBUP00000021048	Uncharacterized protein.	RAD21 cohesin complex component.	0.937
ENSHBUP00000034445	cdca5	ENSHBUP00000034445	ENSHBUP00000000402	Uncharacterized protein.	Cell division cycle associated 5.	0.418
ENSHBUP00000034445	esco2	ENSHBUP00000034445	ENSHBUP00000029607	Uncharacterized protein.	Establishment of sister chromatid cohesion N-acetyltransferase 2.	0.531
ENSHBUP00000034445	pds5a	ENSHBUP00000034445	ENSHBUP00000001977	Uncharacterized protein.	PDS5 cohesin associated factor A.	0.921
ENSHBUP00000034445	pds5b	ENSHBUP00000034445	ENSHBUP00000004964	Uncharacterized protein.	PDS5 cohesin associated factor B.	0.921
ENSHBUP00000034445	rec8	ENSHBUP00000034445	ENSHBUP00000035269	Uncharacterized protein.	REC8 meiotic recombination protein b.	0.890
ENSHBUP00000034445	smc1a	ENSHBUP00000034445	ENSHBUP00000022902	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.958
ENSHBUP00000034445	smc3	ENSHBUP00000034445	ENSHBUP00000031128	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.979
ENSHBUP00000034445	stag1	ENSHBUP00000034445	ENSHBUP00000012871	Uncharacterized protein.	Stromal antigen 1a.	0.894
ENSHBUP00000034445	stag3	ENSHBUP00000034445	ENSHBUP00000025220	Uncharacterized protein.	SCD domain-containing protein.	0.894
ENSHBUP00000034445	wapl	ENSHBUP00000034445	ENSHBUP00000007674	Uncharacterized protein.	WAPL cohesin release factor a.	0.813
LOC102289767	ENSHBUP00000034445	ENSHBUP00000010969	ENSHBUP00000034445	RAD21 cohesin complex component a.	Uncharacterized protein.	0.937