(33 nodes) Mixed, incl. Linker histone H1/H5, domain H15, and Histone H3-tri/dimethyl-lysine-9 demethylase activity network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102291065	High mobility group box 2a. (213 aa)
	LOC102302190	LON peptidase N-terminal domain and ring finger 1. (595 aa)
	lonrf1	LON peptidase N-terminal domain and ring finger 1, like. (778 aa)
	LOC102296528	H1 histone family, member 0. (197 aa)
	LOC102314625	Uncharacterized protein. (553 aa)
	LOC102313430	Si:dkey-154p10.3. (517 aa)
	ENSHBUP00000008898	H15 domain-containing protein. (114 aa)
	ENSHBUP00000009545	Si:ch211-103n10.5. (235 aa)
	hp1bp3	Heterochromatin protein 1, binding protein 3. (615 aa)
	LOC102291528	Uncharacterized protein. (494 aa)
	ENSHBUP00000011442	Si:dkey-89b17.4. (1254 aa)
	ENSHBUP00000013098	H15 domain-containing protein. (223 aa)
	LOC102297810	Ig-like domain-containing protein; Belongs to the MHC class I family. (343 aa)
	LOC102301954	Lysine (K)-specific demethylase 4B. (1067 aa)
	LOC102291550	Uncharacterized protein. (461 aa)
	LOC102301810	Bloodthirsty-related gene family, member 30. (558 aa)
	ENSHBUP00000015089	Uncharacterized protein. (78 aa)
	dffb	DNA fragmentation factor, beta polypeptide (caspase-activated DNase). (343 aa)
	LOC102297789	Uncharacterized protein. (110 aa)
	LOC102313656	PHD finger protein 14. (805 aa)
	ENSHBUP00000019957	Zinc finger protein 618. (798 aa)
	LOC102299540	H15 domain-containing protein. (240 aa)
	LOC102292579	High mobility group box 1b. (265 aa)
	ENSHBUP00000023109	H15 domain-containing protein. (158 aa)
	LOC102300309	High mobility group box 1a. (201 aa)
	znf217	Zinc finger protein 217. (958 aa)
	LOC102302286	Lysine (K)-specific demethylase 4A, genome duplicate b. (1176 aa)
	kdm4a	Lysine (K)-specific demethylase 4A, genome duplicate a. (1062 aa)
	ENSHBUP00000029795	Uncharacterized protein. (382 aa)
	ENSHBUP00000029831	PHD-type domain-containing protein. (243 aa)
	ENSHBUP00000030377	Uncharacterized protein. (861 aa)
	gsdme	Gasdermin Eb. (476 aa)
	fbxo22	F-box protein 22. (385 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000008898	ENSHBUP00000009545	ENSHBUP00000008898	ENSHBUP00000009545	H15 domain-containing protein.	Si:ch211-103n10.5.	0.572
ENSHBUP00000008898	ENSHBUP00000023109	ENSHBUP00000008898	ENSHBUP00000023109	H15 domain-containing protein.	H15 domain-containing protein.	0.570
ENSHBUP00000008898	LOC102291065	ENSHBUP00000008898	ENSHBUP00000001151	H15 domain-containing protein.	High mobility group box 2a.	0.441
ENSHBUP00000008898	LOC102292579	ENSHBUP00000008898	ENSHBUP00000022355	H15 domain-containing protein.	High mobility group box 1b.	0.441
ENSHBUP00000008898	LOC102300309	ENSHBUP00000008898	ENSHBUP00000024529	H15 domain-containing protein.	High mobility group box 1a.	0.441
ENSHBUP00000008898	dffb	ENSHBUP00000008898	ENSHBUP00000016665	H15 domain-containing protein.	DNA fragmentation factor, beta polypeptide (caspase-activated DNase).	0.706
ENSHBUP00000009545	ENSHBUP00000008898	ENSHBUP00000009545	ENSHBUP00000008898	Si:ch211-103n10.5.	H15 domain-containing protein.	0.572
ENSHBUP00000009545	ENSHBUP00000029795	ENSHBUP00000009545	ENSHBUP00000029795	Si:ch211-103n10.5.	Uncharacterized protein.	0.426
ENSHBUP00000009545	ENSHBUP00000029831	ENSHBUP00000009545	ENSHBUP00000029831	Si:ch211-103n10.5.	PHD-type domain-containing protein.	0.426
ENSHBUP00000009545	LOC102291065	ENSHBUP00000009545	ENSHBUP00000001151	Si:ch211-103n10.5.	High mobility group box 2a.	0.551
ENSHBUP00000009545	LOC102292579	ENSHBUP00000009545	ENSHBUP00000022355	Si:ch211-103n10.5.	High mobility group box 1b.	0.551
ENSHBUP00000009545	LOC102296528	ENSHBUP00000009545	ENSHBUP00000003997	Si:ch211-103n10.5.	H1 histone family, member 0.	0.681
ENSHBUP00000009545	LOC102299540	ENSHBUP00000009545	ENSHBUP00000020438	Si:ch211-103n10.5.	H15 domain-containing protein.	0.611
ENSHBUP00000009545	LOC102300309	ENSHBUP00000009545	ENSHBUP00000024529	Si:ch211-103n10.5.	High mobility group box 1a.	0.551
ENSHBUP00000009545	LOC102301954	ENSHBUP00000009545	ENSHBUP00000014099	Si:ch211-103n10.5.	Lysine (K)-specific demethylase 4B.	0.426
ENSHBUP00000009545	LOC102302286	ENSHBUP00000009545	ENSHBUP00000025678	Si:ch211-103n10.5.	Lysine (K)-specific demethylase 4A, genome duplicate b.	0.426
ENSHBUP00000009545	dffb	ENSHBUP00000009545	ENSHBUP00000016665	Si:ch211-103n10.5.	DNA fragmentation factor, beta polypeptide (caspase-activated DNase).	0.698
ENSHBUP00000009545	hp1bp3	ENSHBUP00000009545	ENSHBUP00000010634	Si:ch211-103n10.5.	Heterochromatin protein 1, binding protein 3.	0.611
ENSHBUP00000009545	kdm4a	ENSHBUP00000009545	ENSHBUP00000028842	Si:ch211-103n10.5.	Lysine (K)-specific demethylase 4A, genome duplicate a.	0.426
ENSHBUP00000013098	dffb	ENSHBUP00000013098	ENSHBUP00000016665	H15 domain-containing protein.	DNA fragmentation factor, beta polypeptide (caspase-activated DNase).	0.517