46 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	vps28	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (267 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (437 aa)
	ENSHBUP00000003240	Si:dkey-185p13.1. (73 aa)
	chmp2a	Charged multivesicular body protein 2A. (220 aa)
	chmp1b	Chromatin modifying protein 1B. (199 aa)
	hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate. (752 aa)
	vps37b	Zgc:114173. (282 aa)
	chmp4c	Charged multivesicular body protein 4C. (212 aa)
	vps36	Vacuolar protein sorting 36 homolog. (382 aa)
	CHMP4B	Charged multivesicular body protein 4B. (222 aa)
	vps37c	VPS37C subunit of ESCRT-I. (354 aa)
	stam2	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2. (517 aa)
	LOC102313326	UEV and lactate/malate dehyrogenase domains. (470 aa)
	stam	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1. (751 aa)
	LOC102312367	Si:ch211-284f22.3. (304 aa)
	chmp7	Charged multivesicular body protein 7. (450 aa)
	chmp2b	Charged multivesicular body protein 2Bb. (214 aa)
	mvb12a	MABP domain-containing protein. (286 aa)
	vps37a	VPS37A subunit of ESCRT-I. (416 aa)
	pdcd6ip	Programmed cell death 6 interacting protein. (840 aa)
	rhpn2	Rhophilin, Rho GTPase binding protein 2. (687 aa)
	LOC102308017	Charged multivesicular body protein 4Bb. (220 aa)
	vps4a	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (436 aa)
	ist1	IST1 factor associated with ESCRT-III. (348 aa)
	LOC102294009	Uncharacterized protein. (200 aa)
	chmp6	Charged multivesicular body protein 6. (205 aa)
	LOC102300456	Charged multivesicular body protein 6a. (217 aa)
	snf8	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (257 aa)
	rhpn1	Rhophilin, Rho GTPase binding protein 1. (688 aa)
	vps25	Vacuolar protein sorting 25 homolog. (174 aa)
	mvb12b	Multivesicular body subunit 12Ba. (294 aa)
	vta1	Vesicle (multivesicular body) trafficking 1. (253 aa)
	chmp5	Charged multivesicular body protein 5a. (220 aa)
	tsg101	Tumor susceptibility 101a. (390 aa)
	LOC102289963	Zgc:123278. (192 aa)
	tm9sf1	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (608 aa)
	LOC102295930	Ubiquitin carboxyl-terminal hydrolase. (414 aa)
	LOC102298630	Multivesicular body subunit 12Bb. (253 aa)
	ptpn23	Protein tyrosine phosphatase, non-receptor type 23, a. (1866 aa)
	zfyve19	Zinc finger, FYVE domain containing 19. (424 aa)
	LOC102302510	Charged multivesicular body protein 5b. (219 aa)
	ENSHBUP00000031094	Uncharacterized protein; Belongs to the AAA ATPase family. (304 aa)
	brox	BRO1 domain and CAAX motif containing. (396 aa)
	chmp3	Charged multivesicular body protein 3. (220 aa)
	LOC102296491	Uncharacterized protein. (268 aa)
	chmp1a	Charged multivesicular body protein 1A. (198 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHMP4B	ENSHBUP00000003240	ENSHBUP00000009734	ENSHBUP00000003240	Charged multivesicular body protein 4B.	Si:dkey-185p13.1.	0.884
CHMP4B	ENSHBUP00000031094	ENSHBUP00000009734	ENSHBUP00000031094	Charged multivesicular body protein 4B.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.884
CHMP4B	LOC102289963	ENSHBUP00000009734	ENSHBUP00000028342	Charged multivesicular body protein 4B.	Zgc:123278.	0.783
CHMP4B	LOC102294009	ENSHBUP00000009734	ENSHBUP00000022114	Charged multivesicular body protein 4B.	Uncharacterized protein.	0.892
CHMP4B	LOC102295930	ENSHBUP00000009734	ENSHBUP00000028669	Charged multivesicular body protein 4B.	Ubiquitin carboxyl-terminal hydrolase.	0.611
CHMP4B	LOC102298630	ENSHBUP00000009734	ENSHBUP00000030123	Charged multivesicular body protein 4B.	Multivesicular body subunit 12Bb.	0.675
CHMP4B	LOC102300456	ENSHBUP00000009734	ENSHBUP00000023186	Charged multivesicular body protein 4B.	Charged multivesicular body protein 6a.	0.954
CHMP4B	LOC102302510	ENSHBUP00000009734	ENSHBUP00000030819	Charged multivesicular body protein 4B.	Charged multivesicular body protein 5b.	0.950
CHMP4B	LOC102308017	ENSHBUP00000009734	ENSHBUP00000020446	Charged multivesicular body protein 4B.	Charged multivesicular body protein 4Bb.	0.810
CHMP4B	LOC102312367	ENSHBUP00000009734	ENSHBUP00000011857	Charged multivesicular body protein 4B.	Si:ch211-284f22.3.	0.595
CHMP4B	LOC102313326	ENSHBUP00000009734	ENSHBUP00000010557	Charged multivesicular body protein 4B.	UEV and lactate/malate dehyrogenase domains.	0.715
CHMP4B	VPS4B	ENSHBUP00000009734	ENSHBUP00000003195	Charged multivesicular body protein 4B.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.884
CHMP4B	brox	ENSHBUP00000009734	ENSHBUP00000031798	Charged multivesicular body protein 4B.	BRO1 domain and CAAX motif containing.	0.915
CHMP4B	chmp1a	ENSHBUP00000009734	ENSHBUP00000035345	Charged multivesicular body protein 4B.	Charged multivesicular body protein 1A.	0.922
CHMP4B	chmp1b	ENSHBUP00000009734	ENSHBUP00000003263	Charged multivesicular body protein 4B.	Chromatin modifying protein 1B.	0.892
CHMP4B	chmp2a	ENSHBUP00000009734	ENSHBUP00000003262	Charged multivesicular body protein 4B.	Charged multivesicular body protein 2A.	0.983
CHMP4B	chmp2b	ENSHBUP00000009734	ENSHBUP00000012160	Charged multivesicular body protein 4B.	Charged multivesicular body protein 2Bb.	0.942
CHMP4B	chmp3	ENSHBUP00000009734	ENSHBUP00000034612	Charged multivesicular body protein 4B.	Charged multivesicular body protein 3.	0.986
CHMP4B	chmp4c	ENSHBUP00000009734	ENSHBUP00000007492	Charged multivesicular body protein 4B.	Charged multivesicular body protein 4C.	0.828
CHMP4B	chmp5	ENSHBUP00000009734	ENSHBUP00000028083	Charged multivesicular body protein 4B.	Charged multivesicular body protein 5a.	0.950