28 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	usp48	Ubiquitin specific peptidase 48; Belongs to the peptidase C19 family. (1086 aa)
	hid1	HID1 domain containing b. (804 aa)
	otud6b	OTU domain containing 6B. (298 aa)
	rnf123	Ring finger protein 123. (1199 aa)
	uvssa	UV-stimulated scaffold protein A. (684 aa)
	usp25	Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family. (1169 aa)
	usp40	Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family. (1290 aa)
	LOC102294859	Transmembrane phosphatase with tensin homology. (512 aa)
	LOC102304133	Si:ch1073-184j22.2; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (202 aa)
	usp28	Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family. (1209 aa)
	josd2	Josephin domain containing 2. (183 aa)
	usp5	Ubiquitin carboxyl-terminal hydrolase. (861 aa)
	usp7	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1112 aa)
	LOC102304377	USP domain-containing protein; Belongs to the peptidase C19 family. (337 aa)
	LOC102309537	OTU deubiquitinase 5a. (556 aa)
	ENSHBUP00000019482	USP domain-containing protein; Belongs to the peptidase C19 family. (222 aa)
	LOC102305614	Uncharacterized protein. (800 aa)
	USP15	Ubiquitin carboxyl-terminal hydrolase. (903 aa)
	ubac1	UBA domain containing 1. (343 aa)
	usp4	Ubiquitin carboxyl-terminal hydrolase. (997 aa)
	LOC102313946	Zgc:153044; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (181 aa)
	usp11	Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family. (1011 aa)
	otud1	OTU deubiquitinase 1. (366 aa)
	usp45	Ubiquitin carboxyl-terminal hydrolase. (809 aa)
	LOC102310653	Ubiquitin-like domain-containing protein. (93 aa)
	usp19	Ubiquitin specific peptidase 19. (1074 aa)
	usp13	Ubiquitinyl hydrolase 1. (878 aa)
	josd1	Josephin domain containing 1. (264 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102294859	LOC102304377	ENSHBUP00000007774	ENSHBUP00000017115	Transmembrane phosphatase with tensin homology.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.498
LOC102294859	LOC102310653	ENSHBUP00000007774	ENSHBUP00000032089	Transmembrane phosphatase with tensin homology.	Ubiquitin-like domain-containing protein.	0.410
LOC102294859	usp13	ENSHBUP00000007774	ENSHBUP00000034844	Transmembrane phosphatase with tensin homology.	Ubiquitinyl hydrolase 1.	0.725
LOC102294859	usp25	ENSHBUP00000007774	ENSHBUP00000005112	Transmembrane phosphatase with tensin homology.	Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.	0.549
LOC102294859	usp28	ENSHBUP00000007774	ENSHBUP00000010504	Transmembrane phosphatase with tensin homology.	Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family.	0.549
LOC102294859	usp40	ENSHBUP00000007774	ENSHBUP00000005372	Transmembrane phosphatase with tensin homology.	Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family.	0.829
LOC102294859	usp48	ENSHBUP00000007774	ENSHBUP00000000357	Transmembrane phosphatase with tensin homology.	Ubiquitin specific peptidase 48; Belongs to the peptidase C19 family.	0.498
LOC102294859	usp5	ENSHBUP00000007774	ENSHBUP00000014603	Transmembrane phosphatase with tensin homology.	Ubiquitin carboxyl-terminal hydrolase.	0.725
LOC102294859	usp7	ENSHBUP00000007774	ENSHBUP00000014729	Transmembrane phosphatase with tensin homology.	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family.	0.869
LOC102304133	usp13	ENSHBUP00000008430	ENSHBUP00000034844	Si:ch1073-184j22.2; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Ubiquitinyl hydrolase 1.	0.442
LOC102304133	usp5	ENSHBUP00000008430	ENSHBUP00000014603	Si:ch1073-184j22.2; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Ubiquitin carboxyl-terminal hydrolase.	0.442
LOC102304377	LOC102294859	ENSHBUP00000017115	ENSHBUP00000007774	USP domain-containing protein; Belongs to the peptidase C19 family.	Transmembrane phosphatase with tensin homology.	0.498
LOC102304377	LOC102305614	ENSHBUP00000017115	ENSHBUP00000022672	USP domain-containing protein; Belongs to the peptidase C19 family.	Uncharacterized protein.	0.545
LOC102304377	LOC102310653	ENSHBUP00000017115	ENSHBUP00000032089	USP domain-containing protein; Belongs to the peptidase C19 family.	Ubiquitin-like domain-containing protein.	0.661
LOC102304377	hid1	ENSHBUP00000017115	ENSHBUP00000002101	USP domain-containing protein; Belongs to the peptidase C19 family.	HID1 domain containing b.	0.545
LOC102304377	usp13	ENSHBUP00000017115	ENSHBUP00000034844	USP domain-containing protein; Belongs to the peptidase C19 family.	Ubiquitinyl hydrolase 1.	0.647
LOC102304377	usp5	ENSHBUP00000017115	ENSHBUP00000014603	USP domain-containing protein; Belongs to the peptidase C19 family.	Ubiquitin carboxyl-terminal hydrolase.	0.647
LOC102304377	uvssa	ENSHBUP00000017115	ENSHBUP00000004121	USP domain-containing protein; Belongs to the peptidase C19 family.	UV-stimulated scaffold protein A.	0.781
LOC102305614	LOC102304377	ENSHBUP00000022672	ENSHBUP00000017115	Uncharacterized protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.545
LOC102305614	usp25	ENSHBUP00000022672	ENSHBUP00000005112	Uncharacterized protein.	Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.	0.545