13 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	usp48	Ubiquitin specific peptidase 48; Belongs to the peptidase C19 family. (1086 aa)
	hid1	HID1 domain containing b. (804 aa)
	uvssa	UV-stimulated scaffold protein A. (684 aa)
	usp25	Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family. (1169 aa)
	usp40	Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family. (1290 aa)
	LOC102294859	Transmembrane phosphatase with tensin homology. (512 aa)
	usp28	Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family. (1209 aa)
	usp5	Ubiquitin carboxyl-terminal hydrolase. (861 aa)
	usp7	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1112 aa)
	LOC102304377	USP domain-containing protein; Belongs to the peptidase C19 family. (337 aa)
	LOC102305614	Uncharacterized protein. (800 aa)
	LOC102310653	Ubiquitin-like domain-containing protein. (93 aa)
	usp13	Ubiquitinyl hydrolase 1. (878 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102294859	LOC102304377	ENSHBUP00000007774	ENSHBUP00000017115	Transmembrane phosphatase with tensin homology.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.498
LOC102294859	LOC102310653	ENSHBUP00000007774	ENSHBUP00000032089	Transmembrane phosphatase with tensin homology.	Ubiquitin-like domain-containing protein.	0.410
LOC102294859	usp13	ENSHBUP00000007774	ENSHBUP00000034844	Transmembrane phosphatase with tensin homology.	Ubiquitinyl hydrolase 1.	0.725
LOC102294859	usp25	ENSHBUP00000007774	ENSHBUP00000005112	Transmembrane phosphatase with tensin homology.	Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.	0.549
LOC102294859	usp28	ENSHBUP00000007774	ENSHBUP00000010504	Transmembrane phosphatase with tensin homology.	Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family.	0.549
LOC102294859	usp40	ENSHBUP00000007774	ENSHBUP00000005372	Transmembrane phosphatase with tensin homology.	Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family.	0.829
LOC102294859	usp48	ENSHBUP00000007774	ENSHBUP00000000357	Transmembrane phosphatase with tensin homology.	Ubiquitin specific peptidase 48; Belongs to the peptidase C19 family.	0.498
LOC102294859	usp5	ENSHBUP00000007774	ENSHBUP00000014603	Transmembrane phosphatase with tensin homology.	Ubiquitin carboxyl-terminal hydrolase.	0.725
LOC102294859	usp7	ENSHBUP00000007774	ENSHBUP00000014729	Transmembrane phosphatase with tensin homology.	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family.	0.869
LOC102304377	LOC102294859	ENSHBUP00000017115	ENSHBUP00000007774	USP domain-containing protein; Belongs to the peptidase C19 family.	Transmembrane phosphatase with tensin homology.	0.498
LOC102304377	LOC102305614	ENSHBUP00000017115	ENSHBUP00000022672	USP domain-containing protein; Belongs to the peptidase C19 family.	Uncharacterized protein.	0.545
LOC102304377	LOC102310653	ENSHBUP00000017115	ENSHBUP00000032089	USP domain-containing protein; Belongs to the peptidase C19 family.	Ubiquitin-like domain-containing protein.	0.661
LOC102304377	hid1	ENSHBUP00000017115	ENSHBUP00000002101	USP domain-containing protein; Belongs to the peptidase C19 family.	HID1 domain containing b.	0.545
LOC102304377	usp13	ENSHBUP00000017115	ENSHBUP00000034844	USP domain-containing protein; Belongs to the peptidase C19 family.	Ubiquitinyl hydrolase 1.	0.647
LOC102304377	usp5	ENSHBUP00000017115	ENSHBUP00000014603	USP domain-containing protein; Belongs to the peptidase C19 family.	Ubiquitin carboxyl-terminal hydrolase.	0.647
LOC102304377	uvssa	ENSHBUP00000017115	ENSHBUP00000004121	USP domain-containing protein; Belongs to the peptidase C19 family.	UV-stimulated scaffold protein A.	0.781
LOC102305614	LOC102304377	ENSHBUP00000022672	ENSHBUP00000017115	Uncharacterized protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.545
LOC102305614	usp25	ENSHBUP00000022672	ENSHBUP00000005112	Uncharacterized protein.	Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.	0.545
LOC102305614	usp28	ENSHBUP00000022672	ENSHBUP00000010504	Uncharacterized protein.	Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family.	0.545
LOC102305614	usp40	ENSHBUP00000022672	ENSHBUP00000005372	Uncharacterized protein.	Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family.	0.726