20 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102298283	Nucleolar protein interacting with the FHA domain of MKI67. (282 aa)
	gnl3	Guanine nucleotide binding protein-like 3 (nucleolar). (555 aa)
	rsl1d1	Ribosomal L1 domain containing 1. (359 aa)
	LOC102300525	Uncharacterized protein. (773 aa)
	mak16	Protein MAK16 homolog; Belongs to the MAK16 family. (278 aa)
	pes1	Pescadillo. (473 aa)
	nsa2	NSA2 ribosome biogenesis homolog (S. cerevisiae). (291 aa)
	rsl24d1	Ribosomal L24 domain containing 1. (164 aa)
	bop1	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (742 aa)
	rpf1	Ribosome production factor 1 homolog. (349 aa)
	brix1	Brix domain containing 2. (342 aa)
	ENSHBUP00000016877	Uncharacterized protein. (126 aa)
	noc3l	Nucleolar complex protein 3 homolog. (721 aa)
	nip7	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
	rpf2	Ribosome production factor 2 homolog. (308 aa)
	ddx18	RNA helicase. (652 aa)
	gtpbp4	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (634 aa)
	mrto4	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (239 aa)
	wdr12	Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (421 aa)
	ebna1bp2	EBNA1 binding protein 2. (314 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000016877	LOC102298283	ENSHBUP00000016877	ENSHBUP00000000058	Uncharacterized protein.	Nucleolar protein interacting with the FHA domain of MKI67.	0.999
ENSHBUP00000016877	LOC102300525	ENSHBUP00000016877	ENSHBUP00000002565	Uncharacterized protein.	Uncharacterized protein.	0.969
ENSHBUP00000016877	bop1	ENSHBUP00000016877	ENSHBUP00000011540	Uncharacterized protein.	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.877
ENSHBUP00000016877	brix1	ENSHBUP00000016877	ENSHBUP00000015964	Uncharacterized protein.	Brix domain containing 2.	0.977
ENSHBUP00000016877	ddx18	ENSHBUP00000016877	ENSHBUP00000021482	Uncharacterized protein.	RNA helicase.	0.922
ENSHBUP00000016877	ebna1bp2	ENSHBUP00000016877	ENSHBUP00000035280	Uncharacterized protein.	EBNA1 binding protein 2.	0.995
ENSHBUP00000016877	gnl3	ENSHBUP00000016877	ENSHBUP00000000182	Uncharacterized protein.	Guanine nucleotide binding protein-like 3 (nucleolar).	0.972
ENSHBUP00000016877	gtpbp4	ENSHBUP00000016877	ENSHBUP00000025437	Uncharacterized protein.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.991
ENSHBUP00000016877	mak16	ENSHBUP00000016877	ENSHBUP00000004683	Uncharacterized protein.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.942
ENSHBUP00000016877	mrto4	ENSHBUP00000016877	ENSHBUP00000026800	Uncharacterized protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.992
ENSHBUP00000016877	nip7	ENSHBUP00000016877	ENSHBUP00000017976	Uncharacterized protein.	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.976
ENSHBUP00000016877	noc3l	ENSHBUP00000016877	ENSHBUP00000017360	Uncharacterized protein.	Nucleolar complex protein 3 homolog.	0.944
ENSHBUP00000016877	nsa2	ENSHBUP00000016877	ENSHBUP00000009404	Uncharacterized protein.	NSA2 ribosome biogenesis homolog (S. cerevisiae).	0.985
ENSHBUP00000016877	pes1	ENSHBUP00000016877	ENSHBUP00000006552	Uncharacterized protein.	Pescadillo.	0.984
ENSHBUP00000016877	rpf1	ENSHBUP00000016877	ENSHBUP00000011879	Uncharacterized protein.	Ribosome production factor 1 homolog.	0.944
ENSHBUP00000016877	rpf2	ENSHBUP00000016877	ENSHBUP00000019599	Uncharacterized protein.	Ribosome production factor 2 homolog.	0.999
ENSHBUP00000016877	rsl1d1	ENSHBUP00000016877	ENSHBUP00000000396	Uncharacterized protein.	Ribosomal L1 domain containing 1.	0.994
ENSHBUP00000016877	rsl24d1	ENSHBUP00000016877	ENSHBUP00000010009	Uncharacterized protein.	Ribosomal L24 domain containing 1.	0.994
ENSHBUP00000016877	wdr12	ENSHBUP00000016877	ENSHBUP00000034314	Uncharacterized protein.	Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.965
LOC102298283	ENSHBUP00000016877	ENSHBUP00000000058	ENSHBUP00000016877	Nucleolar protein interacting with the FHA domain of MKI67.	Uncharacterized protein.	0.999