12 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gnl3	Guanine nucleotide binding protein-like 3 (nucleolar). (555 aa)
	rsl1d1	Ribosomal L1 domain containing 1. (359 aa)
	LOC102300525	Uncharacterized protein. (773 aa)
	mak16	Protein MAK16 homolog; Belongs to the MAK16 family. (278 aa)
	pes1	Pescadillo. (473 aa)
	bop1	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (742 aa)
	rpf1	Ribosome production factor 1 homolog. (349 aa)
	brix1	Brix domain containing 2. (342 aa)
	noc3l	Nucleolar complex protein 3 homolog. (721 aa)
	ddx18	RNA helicase. (652 aa)
	wdr12	Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (421 aa)
	ebna1bp2	EBNA1 binding protein 2. (314 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102300525	bop1	ENSHBUP00000002565	ENSHBUP00000011540	Uncharacterized protein.	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.991
LOC102300525	brix1	ENSHBUP00000002565	ENSHBUP00000015964	Uncharacterized protein.	Brix domain containing 2.	0.998
LOC102300525	ddx18	ENSHBUP00000002565	ENSHBUP00000021482	Uncharacterized protein.	RNA helicase.	0.992
LOC102300525	ebna1bp2	ENSHBUP00000002565	ENSHBUP00000035280	Uncharacterized protein.	EBNA1 binding protein 2.	0.997
LOC102300525	gnl3	ENSHBUP00000002565	ENSHBUP00000000182	Uncharacterized protein.	Guanine nucleotide binding protein-like 3 (nucleolar).	0.965
LOC102300525	mak16	ENSHBUP00000002565	ENSHBUP00000004683	Uncharacterized protein.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.995
LOC102300525	noc3l	ENSHBUP00000002565	ENSHBUP00000017360	Uncharacterized protein.	Nucleolar complex protein 3 homolog.	0.990
LOC102300525	pes1	ENSHBUP00000002565	ENSHBUP00000006552	Uncharacterized protein.	Pescadillo.	0.991
LOC102300525	rpf1	ENSHBUP00000002565	ENSHBUP00000011879	Uncharacterized protein.	Ribosome production factor 1 homolog.	0.996
LOC102300525	rsl1d1	ENSHBUP00000002565	ENSHBUP00000000396	Uncharacterized protein.	Ribosomal L1 domain containing 1.	0.997
LOC102300525	wdr12	ENSHBUP00000002565	ENSHBUP00000034314	Uncharacterized protein.	Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.993
bop1	LOC102300525	ENSHBUP00000011540	ENSHBUP00000002565	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.991
bop1	brix1	ENSHBUP00000011540	ENSHBUP00000015964	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Brix domain containing 2.	0.992
bop1	ddx18	ENSHBUP00000011540	ENSHBUP00000021482	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RNA helicase.	0.995
bop1	ebna1bp2	ENSHBUP00000011540	ENSHBUP00000035280	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	EBNA1 binding protein 2.	0.995
bop1	gnl3	ENSHBUP00000011540	ENSHBUP00000000182	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Guanine nucleotide binding protein-like 3 (nucleolar).	0.993
bop1	mak16	ENSHBUP00000011540	ENSHBUP00000004683	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.962
bop1	noc3l	ENSHBUP00000011540	ENSHBUP00000017360	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar complex protein 3 homolog.	0.991
bop1	pes1	ENSHBUP00000011540	ENSHBUP00000006552	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo.	0.998
bop1	rpf1	ENSHBUP00000011540	ENSHBUP00000011879	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome production factor 1 homolog.	0.980