STRINGSTRING
stx8 stx8 LOC102305767 LOC102305767 vamp4 vamp4 stx16 stx16 napa napa vti1b vti1b vti1a vti1a LOC102304219 LOC102304219
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
stx8t-SNARE coiled-coil homology domain-containing protein. (238 aa)
LOC102305767Syntaxin 6; Belongs to the syntaxin family. (260 aa)
vamp4Vesicle-associated membrane protein 4. (153 aa)
stx16Syntaxin 16; Belongs to the syntaxin family. (306 aa)
napaN-ethylmaleimide-sensitive factor attachment protein, alpha b. (332 aa)
vti1bVesicle transport through interaction with t-SNAREs 1B. (226 aa)
vti1aVesicle transport through interaction with t-SNAREs 1A. (224 aa)
LOC102304219Syntaxin 7-like; Belongs to the syntaxin family. (258 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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