STRINGSTRING
rab30 rab30 cog6 cog6 rab6a rab6a sys1 sys1 golga4 golga4 tgoln2 tgoln2 tmf1 tmf1 cog4 cog4 LOC102306323 LOC102306323 ENSHBUP00000015393 ENSHBUP00000015393 LOC102312807 LOC102312807 cog3 cog3 cog8 cog8 gcc2 gcc2 ARFRP1 ARFRP1 arl1 arl1 cog1 cog1 smim7 smim7 cog2 cog2 COG5 COG5 cog7 cog7 LOC102305184 LOC102305184
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rab30RAB30, member RAS oncogene family. (219 aa)
cog6Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (654 aa)
rab6aRAB6A, member RAS oncogene family. (208 aa)
sys1Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family. (156 aa)
golga4Golgin A4. (2116 aa)
tgoln2Uncharacterized protein. (299 aa)
tmf1TATA element modulatory factor 1. (1152 aa)
cog4Component of oligomeric golgi complex 4. (773 aa)
LOC102306323RAB34, member RAS oncogene family a. (266 aa)
ENSHBUP00000015393Component of oligomeric golgi complex 5. (167 aa)
LOC102312807RAB34, member RAS oncogene family b. (222 aa)
cog3Component of oligomeric golgi complex 3. (878 aa)
cog8Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. (621 aa)
gcc2GRIP domain-containing protein. (1665 aa)
ARFRP1ADP-ribosylation factor related protein 1. (142 aa)
arl1ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family. (181 aa)
cog1Component of oligomeric golgi complex 1. (985 aa)
smim7Small integral membrane protein 7. (75 aa)
cog2Component of oligomeric golgi complex 2. (729 aa)
COG5Component of oligomeric golgi complex 5. (521 aa)
cog7Component of oligomeric golgi complex 7. (769 aa)
LOC102305184ADP-ribosylation factor related protein 1. (143 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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