(5 nodes) Mixed, incl. CCR5 chemokine receptor binding, and Protein of unknown function DUF4594 network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSHBUP00000006704	Uncharacterized protein. (274 aa)
	des	Desmin b; Belongs to the intermediate filament family. (470 aa)
	vim	Vimentin like; Belongs to the intermediate filament family. (455 aa)
	nes	IF rod domain-containing protein; Belongs to the intermediate filament family. (1282 aa)
	CCDC9B	Uncharacterized protein. (571 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCDC9B	des	ENSHBUP00000030594	ENSHBUP00000008569	Uncharacterized protein.	Desmin b; Belongs to the intermediate filament family.	0.456
CCDC9B	nes	ENSHBUP00000030594	ENSHBUP00000015606	Uncharacterized protein.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.451
CCDC9B	vim	ENSHBUP00000030594	ENSHBUP00000009857	Uncharacterized protein.	Vimentin like; Belongs to the intermediate filament family.	0.456
ENSHBUP00000006704	des	ENSHBUP00000006704	ENSHBUP00000008569	Uncharacterized protein.	Desmin b; Belongs to the intermediate filament family.	0.456
ENSHBUP00000006704	vim	ENSHBUP00000006704	ENSHBUP00000009857	Uncharacterized protein.	Vimentin like; Belongs to the intermediate filament family.	0.456
des	CCDC9B	ENSHBUP00000008569	ENSHBUP00000030594	Desmin b; Belongs to the intermediate filament family.	Uncharacterized protein.	0.456
des	ENSHBUP00000006704	ENSHBUP00000008569	ENSHBUP00000006704	Desmin b; Belongs to the intermediate filament family.	Uncharacterized protein.	0.456
des	nes	ENSHBUP00000008569	ENSHBUP00000015606	Desmin b; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.632
des	vim	ENSHBUP00000008569	ENSHBUP00000009857	Desmin b; Belongs to the intermediate filament family.	Vimentin like; Belongs to the intermediate filament family.	0.545
nes	CCDC9B	ENSHBUP00000015606	ENSHBUP00000030594	IF rod domain-containing protein; Belongs to the intermediate filament family.	Uncharacterized protein.	0.451
nes	des	ENSHBUP00000015606	ENSHBUP00000008569	IF rod domain-containing protein; Belongs to the intermediate filament family.	Desmin b; Belongs to the intermediate filament family.	0.632
nes	vim	ENSHBUP00000015606	ENSHBUP00000009857	IF rod domain-containing protein; Belongs to the intermediate filament family.	Vimentin like; Belongs to the intermediate filament family.	0.675
vim	CCDC9B	ENSHBUP00000009857	ENSHBUP00000030594	Vimentin like; Belongs to the intermediate filament family.	Uncharacterized protein.	0.456
vim	ENSHBUP00000006704	ENSHBUP00000009857	ENSHBUP00000006704	Vimentin like; Belongs to the intermediate filament family.	Uncharacterized protein.	0.456
vim	des	ENSHBUP00000009857	ENSHBUP00000008569	Vimentin like; Belongs to the intermediate filament family.	Desmin b; Belongs to the intermediate filament family.	0.545
vim	nes	ENSHBUP00000009857	ENSHBUP00000015606	Vimentin like; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.675