18 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nle1	Notchless homolog 1 (Drosophila). (535 aa)
	rpl23a	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (170 aa)
	mrto4	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (239 aa)
	fastkd2	FAST kinase domains 2. (700 aa)
	dhx30	DEAH (Asp-Glu-Ala-His) box helicase 30. (1157 aa)
	mrpl20	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. (149 aa)
	nop53	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (464 aa)
	nop2	NOP2 nucleolar protein homolog (yeast); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (714 aa)
	ddx28	DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. (561 aa)
	rpl10	Ribosomal protein L10. (215 aa)
	mrm2	Mitochondrial rRNA methyltransferase 2. (222 aa)
	RPL5	Ribosomal protein L5. (298 aa)
	RPL5-2	Ribosomal protein L5b. (297 aa)
	rpl6	Ribosomal protein L6. (283 aa)
	rpf2	Ribosome production factor 2 homolog. (308 aa)
	ENSHBUP00000016877	Uncharacterized protein. (126 aa)
	brix1	Brix domain containing 2. (342 aa)
	traf7	TNF receptor-associated factor 7. (640 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000016877	RPL5	ENSHBUP00000016877	ENSHBUP00000006030	Uncharacterized protein.	Ribosomal protein L5.	0.946
ENSHBUP00000016877	RPL5-2	ENSHBUP00000016877	ENSHBUP00000010161	Uncharacterized protein.	Ribosomal protein L5b.	0.946
ENSHBUP00000016877	brix1	ENSHBUP00000016877	ENSHBUP00000015964	Uncharacterized protein.	Brix domain containing 2.	0.977
ENSHBUP00000016877	ddx28	ENSHBUP00000016877	ENSHBUP00000020202	Uncharacterized protein.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.	0.896
ENSHBUP00000016877	dhx30	ENSHBUP00000016877	ENSHBUP00000024577	Uncharacterized protein.	DEAH (Asp-Glu-Ala-His) box helicase 30.	0.486
ENSHBUP00000016877	mrm2	ENSHBUP00000016877	ENSHBUP00000001731	Uncharacterized protein.	Mitochondrial rRNA methyltransferase 2.	0.661
ENSHBUP00000016877	mrto4	ENSHBUP00000016877	ENSHBUP00000026800	Uncharacterized protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.992
ENSHBUP00000016877	nle1	ENSHBUP00000016877	ENSHBUP00000013267	Uncharacterized protein.	Notchless homolog 1 (Drosophila).	0.986
ENSHBUP00000016877	nop2	ENSHBUP00000016877	ENSHBUP00000013130	Uncharacterized protein.	NOP2 nucleolar protein homolog (yeast); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.952
ENSHBUP00000016877	nop53	ENSHBUP00000016877	ENSHBUP00000035427	Uncharacterized protein.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.981
ENSHBUP00000016877	rpf2	ENSHBUP00000016877	ENSHBUP00000019599	Uncharacterized protein.	Ribosome production factor 2 homolog.	0.999
ENSHBUP00000016877	rpl23a	ENSHBUP00000016877	ENSHBUP00000030548	Uncharacterized protein.	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.904
ENSHBUP00000016877	rpl6	ENSHBUP00000016877	ENSHBUP00000011954	Uncharacterized protein.	Ribosomal protein L6.	0.850
RPL5	ENSHBUP00000016877	ENSHBUP00000006030	ENSHBUP00000016877	Ribosomal protein L5.	Uncharacterized protein.	0.946
RPL5	RPL5-2	ENSHBUP00000006030	ENSHBUP00000010161	Ribosomal protein L5.	Ribosomal protein L5b.	0.851
RPL5	brix1	ENSHBUP00000006030	ENSHBUP00000015964	Ribosomal protein L5.	Brix domain containing 2.	0.462
RPL5	mrpl20	ENSHBUP00000006030	ENSHBUP00000021321	Ribosomal protein L5.	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	0.994
RPL5	mrto4	ENSHBUP00000006030	ENSHBUP00000026800	Ribosomal protein L5.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.995
RPL5	nle1	ENSHBUP00000006030	ENSHBUP00000013267	Ribosomal protein L5.	Notchless homolog 1 (Drosophila).	0.905
RPL5	nop2	ENSHBUP00000006030	ENSHBUP00000013130	Ribosomal protein L5.	NOP2 nucleolar protein homolog (yeast); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.593