17 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	bop1	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (742 aa)
	LOC102298283	Nucleolar protein interacting with the FHA domain of MKI67. (282 aa)
	ZNHIT6	Zinc finger HIT-type containing 6. (356 aa)
	ftsj3	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (855 aa)
	wdr12	Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (421 aa)
	znhit2	Zinc finger, HIT-type containing 2. (572 aa)
	gtpbp4	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (634 aa)
	rpl35	Ribosomal protein L35. (123 aa)
	urb1	URB1 ribosome biogenesis homolog. (2255 aa)
	ddx18	RNA helicase. (652 aa)
	nol9	Nucleolar protein 9. (699 aa)
	pes1	Pescadillo. (473 aa)
	ENSHBUP00000020789	Uncharacterized protein. (154 aa)
	znhit3	Zinc finger, HIT-type containing 3. (145 aa)
	rpf2	Ribosome production factor 2 homolog. (308 aa)
	rpl7l1	Ribosomal protein L7-like 1. (283 aa)
	rpl7	Ribosomal protein L7. (245 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000020789	LOC102298283	ENSHBUP00000020789	ENSHBUP00000000058	Uncharacterized protein.	Nucleolar protein interacting with the FHA domain of MKI67.	0.982
ENSHBUP00000020789	bop1	ENSHBUP00000020789	ENSHBUP00000011540	Uncharacterized protein.	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.978
ENSHBUP00000020789	ddx18	ENSHBUP00000020789	ENSHBUP00000021482	Uncharacterized protein.	RNA helicase.	0.953
ENSHBUP00000020789	ftsj3	ENSHBUP00000020789	ENSHBUP00000034637	Uncharacterized protein.	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.966
ENSHBUP00000020789	gtpbp4	ENSHBUP00000020789	ENSHBUP00000025437	Uncharacterized protein.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.982
ENSHBUP00000020789	nol9	ENSHBUP00000020789	ENSHBUP00000005743	Uncharacterized protein.	Nucleolar protein 9.	0.703
ENSHBUP00000020789	pes1	ENSHBUP00000020789	ENSHBUP00000006552	Uncharacterized protein.	Pescadillo.	0.980
ENSHBUP00000020789	rpf2	ENSHBUP00000020789	ENSHBUP00000019599	Uncharacterized protein.	Ribosome production factor 2 homolog.	0.970
ENSHBUP00000020789	rpl35	ENSHBUP00000020789	ENSHBUP00000022712	Uncharacterized protein.	Ribosomal protein L35.	0.996
ENSHBUP00000020789	wdr12	ENSHBUP00000020789	ENSHBUP00000034314	Uncharacterized protein.	Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.972
LOC102298283	ENSHBUP00000020789	ENSHBUP00000000058	ENSHBUP00000020789	Nucleolar protein interacting with the FHA domain of MKI67.	Uncharacterized protein.	0.982
LOC102298283	ZNHIT6	ENSHBUP00000000058	ENSHBUP00000035513	Nucleolar protein interacting with the FHA domain of MKI67.	Zinc finger HIT-type containing 6.	0.608
LOC102298283	bop1	ENSHBUP00000000058	ENSHBUP00000011540	Nucleolar protein interacting with the FHA domain of MKI67.	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.986
LOC102298283	ddx18	ENSHBUP00000000058	ENSHBUP00000021482	Nucleolar protein interacting with the FHA domain of MKI67.	RNA helicase.	0.999
LOC102298283	ftsj3	ENSHBUP00000000058	ENSHBUP00000034637	Nucleolar protein interacting with the FHA domain of MKI67.	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.996
LOC102298283	gtpbp4	ENSHBUP00000000058	ENSHBUP00000025437	Nucleolar protein interacting with the FHA domain of MKI67.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.998
LOC102298283	pes1	ENSHBUP00000000058	ENSHBUP00000006552	Nucleolar protein interacting with the FHA domain of MKI67.	Pescadillo.	0.997
LOC102298283	rpf2	ENSHBUP00000000058	ENSHBUP00000019599	Nucleolar protein interacting with the FHA domain of MKI67.	Ribosome production factor 2 homolog.	0.999
LOC102298283	rpl35	ENSHBUP00000000058	ENSHBUP00000022712	Nucleolar protein interacting with the FHA domain of MKI67.	Ribosomal protein L35.	0.935
LOC102298283	rpl7	ENSHBUP00000000058	ENSHBUP00000018028	Nucleolar protein interacting with the FHA domain of MKI67.	Ribosomal protein L7.	0.982