5 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	lrrk2	Leucine-rich repeat kinase 2. (2426 aa)
	ripk2	Receptor-interacting serine-threonine kinase 2. (576 aa)
	pbk	PDZ binding kinase. (340 aa)
	map3k20	Uncharacterized protein. (833 aa)
	LOC102296248	Protein kinase domain-containing protein. (668 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102296248	map3k20	ENSHBUP00000030615	ENSHBUP00000017218	Protein kinase domain-containing protein.	Uncharacterized protein.	0.852
LOC102296248	ripk2	ENSHBUP00000030615	ENSHBUP00000032069	Protein kinase domain-containing protein.	Receptor-interacting serine-threonine kinase 2.	0.765
map3k20	LOC102296248	ENSHBUP00000017218	ENSHBUP00000030615	Uncharacterized protein.	Protein kinase domain-containing protein.	0.852
map3k20	ripk2	ENSHBUP00000017218	ENSHBUP00000032069	Uncharacterized protein.	Receptor-interacting serine-threonine kinase 2.	0.765
ripk2	LOC102296248	ENSHBUP00000032069	ENSHBUP00000030615	Receptor-interacting serine-threonine kinase 2.	Protein kinase domain-containing protein.	0.765
ripk2	map3k20	ENSHBUP00000032069	ENSHBUP00000017218	Receptor-interacting serine-threonine kinase 2.	Uncharacterized protein.	0.765