50 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	xpot	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (998 aa)
	mcm3ap	Minichromosome maintenance complex component 3 associated protein. (2105 aa)
	nup58	Nucleoporin 58. (599 aa)
	mad1l1	Mitotic arrest deficient 1 like 1. (672 aa)
	LOC102309785	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (96 aa)
	nup214	Uncharacterized protein. (1830 aa)
	eif5a2	Eukaryotic translation initiation factor 5A. (153 aa)
	nup43	Nucleoporin 43. (372 aa)
	nutf2	Nuclear transport factor 2. (127 aa)
	aaas	Achalasia, adrenocortical insufficiency, alacrimia. (520 aa)
	ranbp1	RAN binding protein 1. (212 aa)
	nup188	Nucleoporin 188. (1632 aa)
	cetn3	Centrin 3. (167 aa)
	nup133	Nucleoporin 133. (1135 aa)
	sec13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (331 aa)
	nxt2	Nuclear transport factor 2-like export factor 2. (143 aa)
	ranbp2	RAN binding protein 2. (3058 aa)
	rangap1	RAN GTPase activating protein 1a. (552 aa)
	xpo7	Exportin 7. (1153 aa)
	nup155	Nucleoporin 155. (1365 aa)
	seh1l	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (351 aa)
	LOC102296327	Translocated promoter region a, nuclear basket protein. (1747 aa)
	LOC102310315	Si:ch211-216l23.2. (424 aa)
	ENSHBUP00000001166	Uncharacterized protein. (102 aa)
	EIF5AL1	Eukaryotic translation initiation factor 5A2. (197 aa)
	nup153	Nucleoporin 153. (1526 aa)
	xpo4	Exportin 4. (1159 aa)
	nup107	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (908 aa)
	tpr	Translocated promoter region b, nuclear basket protein. (2192 aa)
	NUP54	Nucleoporin 54. (621 aa)
	ndc1	NDC1 transmembrane nucleoporin. (663 aa)
	nup160	Nucleoporin 160. (1289 aa)
	ENSHBUP00000007056	Nucleoporin 37. (313 aa)
	nup88	Nucleoporin 88. (719 aa)
	gle1	GLE1 RNA export mediator. (717 aa)
	nup85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (540 aa)
	rae1	Ribonucleic acid export 1. (369 aa)
	nup93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
	LOC102301124	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (98 aa)
	nup42	Nucleoporin 42. (488 aa)
	nup205	Nucleoporin 205. (1934 aa)
	kpnb1	Karyopherin (importin) beta 1. (876 aa)
	ENSHBUP00000016048	Uncharacterized protein. (505 aa)
	ENSHBUP00000016099	Peptidase S59 domain-containing protein. (193 aa)
	NUP62	Nucleoporin 62. (562 aa)
	LOC102303326	Eukaryotic translation initiation factor 5A. (156 aa)
	pom121	POM121 transmembrane nucleoporin. (1177 aa)
	ENSHBUP00000017345	AT hook containing transcription factor 1. (1859 aa)
	nup50	Nucleoporin 50. (469 aa)
	nup210	Nucleoporin 210. (1884 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIF5AL1	ranbp2	ENSHBUP00000001218	ENSHBUP00000022471	Eukaryotic translation initiation factor 5A2.	RAN binding protein 2.	0.518
EIF5AL1	xpo4	ENSHBUP00000001218	ENSHBUP00000002617	Eukaryotic translation initiation factor 5A2.	Exportin 4.	0.787
EIF5AL1	xpo7	ENSHBUP00000001218	ENSHBUP00000021914	Eukaryotic translation initiation factor 5A2.	Exportin 7.	0.411
ENSHBUP00000001166	ENSHBUP00000007056	ENSHBUP00000001166	ENSHBUP00000007056	Uncharacterized protein.	Nucleoporin 37.	0.983
ENSHBUP00000001166	ENSHBUP00000016048	ENSHBUP00000001166	ENSHBUP00000016048	Uncharacterized protein.	Uncharacterized protein.	0.969
ENSHBUP00000001166	ENSHBUP00000016099	ENSHBUP00000001166	ENSHBUP00000016099	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.969
ENSHBUP00000001166	ENSHBUP00000017345	ENSHBUP00000001166	ENSHBUP00000017345	Uncharacterized protein.	AT hook containing transcription factor 1.	0.984
ENSHBUP00000001166	LOC102296327	ENSHBUP00000001166	ENSHBUP00000017617	Uncharacterized protein.	Translocated promoter region a, nuclear basket protein.	0.737
ENSHBUP00000001166	LOC102310315	ENSHBUP00000001166	ENSHBUP00000000501	Uncharacterized protein.	Si:ch211-216l23.2.	0.904
ENSHBUP00000001166	NUP54	ENSHBUP00000001166	ENSHBUP00000004619	Uncharacterized protein.	Nucleoporin 54.	0.989
ENSHBUP00000001166	NUP62	ENSHBUP00000001166	ENSHBUP00000016945	Uncharacterized protein.	Nucleoporin 62.	0.970
ENSHBUP00000001166	aaas	ENSHBUP00000001166	ENSHBUP00000026302	Uncharacterized protein.	Achalasia, adrenocortical insufficiency, alacrimia.	0.981
ENSHBUP00000001166	gle1	ENSHBUP00000001166	ENSHBUP00000009275	Uncharacterized protein.	GLE1 RNA export mediator.	0.861
ENSHBUP00000001166	kpnb1	ENSHBUP00000001166	ENSHBUP00000014900	Uncharacterized protein.	Karyopherin (importin) beta 1.	0.511
ENSHBUP00000001166	ndc1	ENSHBUP00000001166	ENSHBUP00000005331	Uncharacterized protein.	NDC1 transmembrane nucleoporin.	0.988
ENSHBUP00000001166	nup107	ENSHBUP00000001166	ENSHBUP00000002898	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.988
ENSHBUP00000001166	nup133	ENSHBUP00000001166	ENSHBUP00000025014	Uncharacterized protein.	Nucleoporin 133.	0.980
ENSHBUP00000001166	nup153	ENSHBUP00000001166	ENSHBUP00000001783	Uncharacterized protein.	Nucleoporin 153.	0.949
ENSHBUP00000001166	nup155	ENSHBUP00000001166	ENSHBUP00000019597	Uncharacterized protein.	Nucleoporin 155.	0.999
ENSHBUP00000001166	nup160	ENSHBUP00000001166	ENSHBUP00000006035	Uncharacterized protein.	Nucleoporin 160.	0.980