STRINGSTRING
thoc3 thoc3 mcm3ap mcm3ap poldip3 poldip3 xpot xpot LOC102308132 LOC102308132 nup214 nup214 sem1 sem1 LOC102309785 LOC102309785 thoc6 thoc6 thoc5 thoc5 sarnp sarnp nup188 nup188 chtop chtop LOC102313919 LOC102313919 nup133 nup133 ncbp2 ncbp2 thoc2 thoc2 LOC102289472 LOC102289472 LOC102313071 LOC102313071 LOC102305488 LOC102305488 xpo5 xpo5 LOC102293583 LOC102293583 nup155 nup155 NCBP1 NCBP1 DDX39A DDX39A LOC102310120 LOC102310120 LOC102296327 LOC102296327 pom121 pom121 ythdc1 ythdc1 NUP62 NUP62 alkbh5 alkbh5 ENSHBUP00000015737 ENSHBUP00000015737 fyttd1 fyttd1 polr2d polr2d phax phax LOC102301124 LOC102301124 nxf1 nxf1 nup93 nup93 rae1 rae1 nup85 nup85 gle1 gle1 nol6 nol6 thoc1 thoc1 nup160 nup160 ssb ssb tpr tpr ENSHBUP00000004062 ENSHBUP00000004062 nup107 nup107 thoc7 thoc7 ENSHBUP00000002785 ENSHBUP00000002785 ddx39a ddx39a SRSF3 SRSF3 nup153 nup153 ENSHBUP00000000398 ENSHBUP00000000398 alyref alyref pcid2 pcid2 LOC102302702 LOC102302702
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
thoc3THO complex 3. (322 aa)
mcm3apMinichromosome maintenance complex component 3 associated protein. (2105 aa)
poldip3Polymerase (DNA-directed), delta interacting protein 3. (581 aa)
xpotExportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (998 aa)
LOC102308132Aly/REF export factor. (273 aa)
nup214Uncharacterized protein. (1830 aa)
sem1SEM1 26S proteasome complex subunit. (70 aa)
LOC102309785Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (96 aa)
thoc6THO complex 6. (352 aa)
thoc5THO complex 5. (690 aa)
sarnpSAP domain containing ribonucleoprotein. (210 aa)
nup188Nucleoporin 188. (1632 aa)
chtopChromatin target of PRMT1a. (241 aa)
LOC102313919Zgc:193690. (483 aa)
nup133Nucleoporin 133. (1135 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (191 aa)
thoc2THO complex 2. (1460 aa)
LOC102289472DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B. (225 aa)
LOC102313071Nucleophosmin 1a. (315 aa)
LOC102305488RRM domain-containing protein. (168 aa)
xpo5Exportin 5. (1236 aa)
LOC102293583Uncharacterized protein. (270 aa)
nup155Nucleoporin 155. (1365 aa)
NCBP1Nuclear cap binding protein subunit 1. (795 aa)
DDX39ADExD-box helicase 39A. (427 aa)
LOC102310120Nucleophosmin 1b. (313 aa)
LOC102296327Translocated promoter region a, nuclear basket protein. (1747 aa)
pom121POM121 transmembrane nucleoporin. (1177 aa)
ythdc1YTH domain containing 1. (683 aa)
NUP62Nucleoporin 62. (562 aa)
alkbh5AlkB homolog 5, RNA demethylase. (357 aa)
ENSHBUP00000015737TFIIS N-terminal domain-containing protein. (661 aa)
fyttd1Uncharacterized protein. (318 aa)
polr2dRPOL4c domain-containing protein. (509 aa)
phaxPhosphorylated adaptor for RNA export. (409 aa)
LOC102301124Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (98 aa)
nxf1Zgc:153681. (639 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
rae1Ribonucleic acid export 1. (369 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (540 aa)
gle1GLE1 RNA export mediator. (717 aa)
nol6Nucleolar protein 6. (1183 aa)
thoc1THO complex 1. (654 aa)
nup160Nucleoporin 160. (1289 aa)
ssbSmall RNA binding exonuclease protection factor La. (393 aa)
tprTranslocated promoter region b, nuclear basket protein. (2192 aa)
ENSHBUP00000004062TSC complex subunit 1b. (432 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (908 aa)
thoc7THO complex 7. (203 aa)
ENSHBUP00000002785Uncharacterized protein. (243 aa)
ddx39aUncharacterized protein. (427 aa)
SRSF3Serine and arginine rich splicing factor 3. (171 aa)
nup153Nucleoporin 153. (1526 aa)
ENSHBUP00000000398Uncharacterized protein. (265 aa)
alyrefRRM domain-containing protein. (265 aa)
pcid2PCI domain containing 2. (377 aa)
LOC102302702DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast). (487 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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