STRINGSTRING
LOC102308013 LOC102308013 fxn fxn ENSHBUP00000026295 ENSHBUP00000026295 ctns ctns cntn2 cntn2 GLRB GLRB zmpste24 zmpste24 cln8 cln8 gbx1 gbx1 klhl5 klhl5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102308013Kelch-like family member 4. (731 aa)
fxnFrataxin. (207 aa)
ENSHBUP00000026295Glycine receptor, beta a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (425 aa)
ctnsCystinosin, lysosomal cystine transporter. (381 aa)
cntn2Contactin 2. (977 aa)
GLRBGlycine receptor beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (496 aa)
zmpste24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (467 aa)
cln8CLN8 transmembrane ER and ERGIC protein. (288 aa)
gbx1Gastrulation brain homeobox 1. (321 aa)
klhl5Kelch-like family member 5. (789 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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