29 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102307962	Netrin 1b. (600 aa)
	ENSHBUP00000000495	Ras homolog gene family, member Gd. (128 aa)
	LOC102299320	Netrin 5. (832 aa)
	LOC102296411	NK2 homeobox 2b. (254 aa)
	LOC102291593	Ring finger protein 165a. (345 aa)
	cdk5	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	e2f7	E2F transcription factor 7. (793 aa)
	LOC102310114	Survival of motor neuron 1, telomeric. (290 aa)
	sema3f	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (805 aa)
	tmem41b	Transmembrane protein 41B. (306 aa)
	LOC102300412	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. (859 aa)
	ENSHBUP00000017017	ANK_REP_REGION domain-containing protein. (181 aa)
	ENSHBUP00000017038	PRKG1_interact domain-containing protein. (117 aa)
	LOC102298841	Ras homolog family member Gb. (191 aa)
	LOC102307404	NK2 homeobox 2a. (262 aa)
	LOC102288772	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (934 aa)
	chst11	Carbohydrate sulfotransferase. (395 aa)
	LOC102288507	Ring finger protein 165b. (371 aa)
	NTN1	Netrin 1. (606 aa)
	CDH2	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (906 aa)
	lhx1	LIM homeobox 1a. (407 aa)
	e2f8	E2F transcription factor 8. (903 aa)
	sema3a	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (799 aa)
	chodl	Chondrolectin. (304 aa)
	ppp1r12a	Protein phosphatase 1 regulatory subunit. (1044 aa)
	LOC102297691	Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins. (840 aa)
	LOC102309863	Netrin 2. (634 aa)
	LOC102291717	Notum pectinacetylesterase 2. (501 aa)
	rest	RE1-silencing transcription factor. (972 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDH2	LOC102297691	ENSHBUP00000023884	ENSHBUP00000028495	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins.	0.851
ENSHBUP00000000495	ENSHBUP00000017017	ENSHBUP00000000495	ENSHBUP00000017017	Ras homolog gene family, member Gd.	ANK_REP_REGION domain-containing protein.	0.481
ENSHBUP00000000495	ENSHBUP00000017038	ENSHBUP00000000495	ENSHBUP00000017038	Ras homolog gene family, member Gd.	PRKG1_interact domain-containing protein.	0.481
ENSHBUP00000000495	LOC102298841	ENSHBUP00000000495	ENSHBUP00000017302	Ras homolog gene family, member Gd.	Ras homolog family member Gb.	0.830
ENSHBUP00000000495	ppp1r12a	ENSHBUP00000000495	ENSHBUP00000028287	Ras homolog gene family, member Gd.	Protein phosphatase 1 regulatory subunit.	0.481
ENSHBUP00000017017	ENSHBUP00000000495	ENSHBUP00000017017	ENSHBUP00000000495	ANK_REP_REGION domain-containing protein.	Ras homolog gene family, member Gd.	0.481
ENSHBUP00000017017	LOC102298841	ENSHBUP00000017017	ENSHBUP00000017302	ANK_REP_REGION domain-containing protein.	Ras homolog family member Gb.	0.481
ENSHBUP00000017017	ppp1r12a	ENSHBUP00000017017	ENSHBUP00000028287	ANK_REP_REGION domain-containing protein.	Protein phosphatase 1 regulatory subunit.	0.811
ENSHBUP00000017038	ENSHBUP00000000495	ENSHBUP00000017038	ENSHBUP00000000495	PRKG1_interact domain-containing protein.	Ras homolog gene family, member Gd.	0.481
ENSHBUP00000017038	LOC102298841	ENSHBUP00000017038	ENSHBUP00000017302	PRKG1_interact domain-containing protein.	Ras homolog family member Gb.	0.481
LOC102288772	cdk5	ENSHBUP00000022064	ENSHBUP00000006807	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	0.417
LOC102297691	CDH2	ENSHBUP00000028495	ENSHBUP00000023884	Cadherin 2, type 1, N-cadherin (neuronal); Cadherins are calcium-dependent cell adhesion proteins.	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	0.851
LOC102298841	ENSHBUP00000000495	ENSHBUP00000017302	ENSHBUP00000000495	Ras homolog family member Gb.	Ras homolog gene family, member Gd.	0.830
LOC102298841	ENSHBUP00000017017	ENSHBUP00000017302	ENSHBUP00000017017	Ras homolog family member Gb.	ANK_REP_REGION domain-containing protein.	0.481
LOC102298841	ENSHBUP00000017038	ENSHBUP00000017302	ENSHBUP00000017038	Ras homolog family member Gb.	PRKG1_interact domain-containing protein.	0.481
LOC102298841	ppp1r12a	ENSHBUP00000017302	ENSHBUP00000028287	Ras homolog family member Gb.	Protein phosphatase 1 regulatory subunit.	0.481
LOC102300412	cdk5	ENSHBUP00000016845	ENSHBUP00000006807	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family.	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	0.683
cdk5	LOC102288772	ENSHBUP00000006807	ENSHBUP00000022064	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family.	0.417
cdk5	LOC102300412	ENSHBUP00000006807	ENSHBUP00000016845	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family.	0.683
cdk5	sema3a	ENSHBUP00000006807	ENSHBUP00000026390	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family.	0.683