(17 nodes) Epithelial structure maintenance network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cracd	Si:dkeyp-117h8.2. (1287 aa)
	crocc2	Ciliary rootlet coiled-coil, rootletin family member 2. (1687 aa)
	LOC102291568	Uncharacterized protein. (309 aa)
	prrc1	Proline-rich coiled-coil 1. (437 aa)
	PBLD	Phenazine biosynthesis like protein domain containing. (287 aa)
	LOC102295114	MADS-box domain-containing protein. (503 aa)
	SRF	Serum response factor. (597 aa)
	LOC102292456	Innate immunity activator b. (615 aa)
	strap	Serine/threonine kinase receptor associated protein. (329 aa)
	inava	Innate immunity activator a. (577 aa)
	tert	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1084 aa)
	mks1	MKS transition zone complex subunit 1. (563 aa)
	crocc	Uncharacterized protein. (1921 aa)
	ZNF830	Zinc finger protein 830. (347 aa)
	LOC102312437	Uncharacterized protein. (278 aa)
	ENSHBUP00000015283	Uncharacterized protein. (1728 aa)
	uhrf1	Ubiquitin-like with PHD and ring finger domains 1. (776 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102295114	SRF	ENSHBUP00000030051	ENSHBUP00000027140	MADS-box domain-containing protein.	Serum response factor.	0.854
LOC102312437	strap	ENSHBUP00000004651	ENSHBUP00000021584	Uncharacterized protein.	Serine/threonine kinase receptor associated protein.	0.554
PBLD	strap	ENSHBUP00000031957	ENSHBUP00000021584	Phenazine biosynthesis like protein domain containing.	Serine/threonine kinase receptor associated protein.	0.676
SRF	LOC102295114	ENSHBUP00000027140	ENSHBUP00000030051	Serum response factor.	MADS-box domain-containing protein.	0.854
strap	LOC102312437	ENSHBUP00000021584	ENSHBUP00000004651	Serine/threonine kinase receptor associated protein.	Uncharacterized protein.	0.554
strap	PBLD	ENSHBUP00000021584	ENSHBUP00000031957	Serine/threonine kinase receptor associated protein.	Phenazine biosynthesis like protein domain containing.	0.676