56 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	syt9	Uncharacterized protein. (527 aa)
	LOC102294251	Regulating synaptic membrane exocytosis 3. (323 aa)
	STX19	Syntaxin 19. (302 aa)
	LOC102298248	Uncharacterized protein. (1477 aa)
	ENSHBUP00000004259	C2 domain-containing protein. (410 aa)
	ENSHBUP00000004267	Uncharacterized protein. (1094 aa)
	ERC1	ELKS/RAB6-interacting/CAST family member 1. (1150 aa)
	LOC102293437	Uncharacterized protein. (1172 aa)
	LOC102288766	Synaptotagmin IIa. (428 aa)
	ENSHBUP00000006778	Proline-rich transmembrane protein 2. (184 aa)
	STX11	t-SNARE coiled-coil homology domain-containing protein. (311 aa)
	STX11-2	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (318 aa)
	erc1	ELKS/RAB6-interacting/CAST family member 1a. (1115 aa)
	UNC13B	Unc-13 homolog B. (1600 aa)
	stx3	Syntaxin 3A; Belongs to the syntaxin family. (288 aa)
	LOC102300384	Synaptotagmin Ia. (422 aa)
	erc2	ELKS/RAB6-interacting/CAST family member 2. (950 aa)
	LOC102312410	Uncharacterized protein. (1291 aa)
	snap29	Synaptosome associated protein 29. (272 aa)
	LOC102311443	Otoferlin a. (1960 aa)
	ENSHBUP00000011914	Uncharacterized protein. (72 aa)
	LOC102307135	Synaptotagmin VIIb. (677 aa)
	stx2	Syntaxin 2b; Belongs to the syntaxin family. (293 aa)
	LOC102296820	Synaptotagmin Vb. (419 aa)
	LOC102303092	Synaptotagmin VIIa. (730 aa)
	LOC102304224	Ca++-dependent secretion activator 2. (619 aa)
	LOC102311629	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (134 aa)
	p2rx7	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (580 aa)
	cplx3	Complexin 3b. (156 aa)
	RIMS1	Regulating synaptic membrane exocytosis 1. (1463 aa)
	LOC102292079	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (287 aa)
	UNC13C	Unc-13 homolog C. (2572 aa)
	LOC102294793	Syntaxin 4; Belongs to the syntaxin family. (292 aa)
	LOC102292902	Uncharacterized protein. (1480 aa)
	fer1l6	Fer-1 like family member 6. (1662 aa)
	ERC2	Uncharacterized protein. (1126 aa)
	snapin	SNAP associated protein. (156 aa)
	snap47	Synaptosome associated protein 47. (425 aa)
	STX11-3	Syntaxin 11. (259 aa)
	LOC102292315	Uncharacterized protein. (430 aa)
	LOC102295871	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (285 aa)
	LOC102290094	Complexin 4a. (159 aa)
	snap25	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (204 aa)
	stx1b	Syntaxin 1B; Belongs to the syntaxin family. (288 aa)
	STX11-4	Syntaxin 11. (281 aa)
	LOC102294849	Otoferlin b. (1696 aa)
	snap23	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (215 aa)
	RIMS2	Regulating synaptic membrane exocytosis 2. (1579 aa)
	LOC102297438	Synaptotagmin IXa. (563 aa)
	LOC102301058	Synaptotagmin Ib. (408 aa)
	ENSHBUP00000033714	Uncharacterized protein. (195 aa)
	CPLX1	Complexin 1. (133 aa)
	syt12	Synaptotagmin XII. (429 aa)
	UNC13A	Unc-13 homolog A. (1872 aa)
	cadps	Ca2+-dependent activator protein for secretion b. (1329 aa)
	cplx2	Complexin 2. (134 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPLX1	LOC102290094	ENSHBUP00000033787	ENSHBUP00000027917	Complexin 1.	Complexin 4a.	0.861
CPLX1	LOC102311629	ENSHBUP00000033787	ENSHBUP00000018469	Complexin 1.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.584
CPLX1	cplx2	ENSHBUP00000033787	ENSHBUP00000035591	Complexin 1.	Complexin 2.	0.843
CPLX1	cplx3	ENSHBUP00000033787	ENSHBUP00000018784	Complexin 1.	Complexin 3b.	0.859
CPLX1	snap25	ENSHBUP00000033787	ENSHBUP00000028402	Complexin 1.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.584
ENSHBUP00000004259	ENSHBUP00000004267	ENSHBUP00000004259	ENSHBUP00000004267	C2 domain-containing protein.	Uncharacterized protein.	0.822
ENSHBUP00000004259	LOC102288766	ENSHBUP00000004259	ENSHBUP00000006499	C2 domain-containing protein.	Synaptotagmin IIa.	0.590
ENSHBUP00000004259	LOC102292079	ENSHBUP00000004259	ENSHBUP00000022147	C2 domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.638
ENSHBUP00000004259	LOC102292315	ENSHBUP00000004259	ENSHBUP00000027655	C2 domain-containing protein.	Uncharacterized protein.	0.590
ENSHBUP00000004259	LOC102294251	ENSHBUP00000004259	ENSHBUP00000001224	C2 domain-containing protein.	Regulating synaptic membrane exocytosis 3.	0.779
ENSHBUP00000004259	LOC102294793	ENSHBUP00000004259	ENSHBUP00000023488	C2 domain-containing protein.	Syntaxin 4; Belongs to the syntaxin family.	0.638
ENSHBUP00000004259	LOC102295871	ENSHBUP00000004259	ENSHBUP00000027905	C2 domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.638
ENSHBUP00000004259	LOC102296820	ENSHBUP00000004259	ENSHBUP00000016468	C2 domain-containing protein.	Synaptotagmin Vb.	0.590
ENSHBUP00000004259	LOC102298248	ENSHBUP00000004259	ENSHBUP00000002358	C2 domain-containing protein.	Uncharacterized protein.	0.779
ENSHBUP00000004259	LOC102300384	ENSHBUP00000004259	ENSHBUP00000010627	C2 domain-containing protein.	Synaptotagmin Ia.	0.590
ENSHBUP00000004259	LOC102301058	ENSHBUP00000004259	ENSHBUP00000031477	C2 domain-containing protein.	Synaptotagmin Ib.	0.590
ENSHBUP00000004259	LOC102311629	ENSHBUP00000004259	ENSHBUP00000018469	C2 domain-containing protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.692
ENSHBUP00000004259	LOC102312410	ENSHBUP00000004259	ENSHBUP00000011474	C2 domain-containing protein.	Uncharacterized protein.	0.999
ENSHBUP00000004259	RIMS1	ENSHBUP00000004259	ENSHBUP00000021566	C2 domain-containing protein.	Regulating synaptic membrane exocytosis 1.	0.779
ENSHBUP00000004259	RIMS2	ENSHBUP00000004259	ENSHBUP00000030701	C2 domain-containing protein.	Regulating synaptic membrane exocytosis 2.	0.999