19 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSHBUP00000006778	Proline-rich transmembrane protein 2. (184 aa)
	UNC13A	Unc-13 homolog A. (1872 aa)
	lrrk2	Leucine-rich repeat kinase 2. (2426 aa)
	sybu	Syntabulin (syntaxin-interacting). (661 aa)
	snap25	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (204 aa)
	LOC102305451	Syntaxin binding protein 1b; Belongs to the STXBP/unc-18/SEC1 family. (563 aa)
	stxbp3	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (614 aa)
	LOC102305424	N-ethylmaleimide-sensitive factor b. (746 aa)
	ENSHBUP00000004259	C2 domain-containing protein. (410 aa)
	ENSHBUP00000004267	Uncharacterized protein. (1094 aa)
	LOC102297066	N-ethylmaleimide-sensitive factor a. (751 aa)
	UNC13B	Unc-13 homolog B. (1600 aa)
	LOC102289269	Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family. (566 aa)
	ENSHBUP00000011914	Uncharacterized protein. (72 aa)
	LOC102311629	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (134 aa)
	LOC102297639	Syntaphilin b. (876 aa)
	UNC13C	Unc-13 homolog C. (2572 aa)
	stxbp2	Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family. (592 aa)
	LOC102292902	Uncharacterized protein. (1480 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000004259	ENSHBUP00000004267	ENSHBUP00000004259	ENSHBUP00000004267	C2 domain-containing protein.	Uncharacterized protein.	0.822
ENSHBUP00000004259	LOC102289269	ENSHBUP00000004259	ENSHBUP00000009231	C2 domain-containing protein.	Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.	0.702
ENSHBUP00000004259	LOC102305451	ENSHBUP00000004259	ENSHBUP00000009179	C2 domain-containing protein.	Syntaxin binding protein 1b; Belongs to the STXBP/unc-18/SEC1 family.	0.702
ENSHBUP00000004259	LOC102311629	ENSHBUP00000004259	ENSHBUP00000018469	C2 domain-containing protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.692
ENSHBUP00000004259	UNC13C	ENSHBUP00000004259	ENSHBUP00000022214	C2 domain-containing protein.	Unc-13 homolog C.	0.508
ENSHBUP00000004259	snap25	ENSHBUP00000004259	ENSHBUP00000028402	C2 domain-containing protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.692
ENSHBUP00000004259	stxbp2	ENSHBUP00000004259	ENSHBUP00000022580	C2 domain-containing protein.	Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.	0.702
ENSHBUP00000004259	stxbp3	ENSHBUP00000004259	ENSHBUP00000002978	C2 domain-containing protein.	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.	0.682
ENSHBUP00000004267	ENSHBUP00000004259	ENSHBUP00000004267	ENSHBUP00000004259	Uncharacterized protein.	C2 domain-containing protein.	0.822
ENSHBUP00000004267	LOC102289269	ENSHBUP00000004267	ENSHBUP00000009231	Uncharacterized protein.	Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.	0.702
ENSHBUP00000004267	LOC102305451	ENSHBUP00000004267	ENSHBUP00000009179	Uncharacterized protein.	Syntaxin binding protein 1b; Belongs to the STXBP/unc-18/SEC1 family.	0.702
ENSHBUP00000004267	LOC102311629	ENSHBUP00000004267	ENSHBUP00000018469	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.692
ENSHBUP00000004267	snap25	ENSHBUP00000004267	ENSHBUP00000028402	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.692
ENSHBUP00000004267	stxbp2	ENSHBUP00000004267	ENSHBUP00000022580	Uncharacterized protein.	Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.	0.702
ENSHBUP00000004267	stxbp3	ENSHBUP00000004267	ENSHBUP00000002978	Uncharacterized protein.	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.	0.682
ENSHBUP00000006778	LOC102311629	ENSHBUP00000006778	ENSHBUP00000018469	Proline-rich transmembrane protein 2.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.579
ENSHBUP00000006778	snap25	ENSHBUP00000006778	ENSHBUP00000028402	Proline-rich transmembrane protein 2.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.579
ENSHBUP00000011914	LOC102311629	ENSHBUP00000011914	ENSHBUP00000018469	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.546
ENSHBUP00000011914	snap25	ENSHBUP00000011914	ENSHBUP00000028402	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.546
LOC102289269	ENSHBUP00000004259	ENSHBUP00000009231	ENSHBUP00000004259	Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.	C2 domain-containing protein.	0.702