(11 nodes) Viral release from host cell network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tsg101	Tumor susceptibility 101a. (390 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (437 aa)
	ENSHBUP00000003240	Si:dkey-185p13.1. (73 aa)
	vps37b	Zgc:114173. (282 aa)
	ddb1	Damage-specific DNA binding protein 1. (1140 aa)
	vps4a	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (436 aa)
	ist1	IST1 factor associated with ESCRT-III. (348 aa)
	pc	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1155 aa)
	ENSHBUP00000031094	Uncharacterized protein; Belongs to the AAA ATPase family. (304 aa)
	trim62	Tripartite motif containing 62, tandem duplicate 1. (475 aa)
	LOC102289963	Zgc:123278. (192 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000003240	LOC102289963	ENSHBUP00000003240	ENSHBUP00000028342	Si:dkey-185p13.1.	Zgc:123278.	0.533
ENSHBUP00000003240	ist1	ENSHBUP00000003240	ENSHBUP00000021150	Si:dkey-185p13.1.	IST1 factor associated with ESCRT-III.	0.963
ENSHBUP00000003240	tsg101	ENSHBUP00000003240	ENSHBUP00000028331	Si:dkey-185p13.1.	Tumor susceptibility 101a.	0.533
ENSHBUP00000003240	vps37b	ENSHBUP00000003240	ENSHBUP00000004870	Si:dkey-185p13.1.	Zgc:114173.	0.405
ENSHBUP00000031094	LOC102289963	ENSHBUP00000031094	ENSHBUP00000028342	Uncharacterized protein; Belongs to the AAA ATPase family.	Zgc:123278.	0.533
ENSHBUP00000031094	VPS4B	ENSHBUP00000031094	ENSHBUP00000003195	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.831
ENSHBUP00000031094	ist1	ENSHBUP00000031094	ENSHBUP00000021150	Uncharacterized protein; Belongs to the AAA ATPase family.	IST1 factor associated with ESCRT-III.	0.963
ENSHBUP00000031094	tsg101	ENSHBUP00000031094	ENSHBUP00000028331	Uncharacterized protein; Belongs to the AAA ATPase family.	Tumor susceptibility 101a.	0.533
ENSHBUP00000031094	vps37b	ENSHBUP00000031094	ENSHBUP00000004870	Uncharacterized protein; Belongs to the AAA ATPase family.	Zgc:114173.	0.405
ENSHBUP00000031094	vps4a	ENSHBUP00000031094	ENSHBUP00000021092	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.833
LOC102289963	ENSHBUP00000003240	ENSHBUP00000028342	ENSHBUP00000003240	Zgc:123278.	Si:dkey-185p13.1.	0.533
LOC102289963	ENSHBUP00000031094	ENSHBUP00000028342	ENSHBUP00000031094	Zgc:123278.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.533
LOC102289963	VPS4B	ENSHBUP00000028342	ENSHBUP00000003195	Zgc:123278.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.533
LOC102289963	ist1	ENSHBUP00000028342	ENSHBUP00000021150	Zgc:123278.	IST1 factor associated with ESCRT-III.	0.463
LOC102289963	vps37b	ENSHBUP00000028342	ENSHBUP00000004870	Zgc:123278.	Zgc:114173.	0.984
LOC102289963	vps4a	ENSHBUP00000028342	ENSHBUP00000021092	Zgc:123278.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.533
VPS4B	ENSHBUP00000031094	ENSHBUP00000003195	ENSHBUP00000031094	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.831
VPS4B	LOC102289963	ENSHBUP00000003195	ENSHBUP00000028342	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Zgc:123278.	0.533
VPS4B	ist1	ENSHBUP00000003195	ENSHBUP00000021150	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	IST1 factor associated with ESCRT-III.	0.963
VPS4B	tsg101	ENSHBUP00000003195	ENSHBUP00000028331	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	Tumor susceptibility 101a.	0.533