STRINGSTRING
abt1 abt1 mnx1 mnx1 SCYL1 SCYL1 clp1 clp1 mib1 mib1 surf1 surf1 LOC102295856 LOC102295856 scyl3 scyl3 cln8 cln8 phox2a phox2a shh shh notch1 notch1 gbx1 gbx1 tctn3 tctn3 LOC102289249 LOC102289249 LOC102307791 LOC102307791 ENSHBUP00000004171 ENSHBUP00000004171 zc4h2 zc4h2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
abt1Activator of basal transcription 1. (405 aa)
mnx1Motor neuron and pancreas homeobox 1. (314 aa)
SCYL1SCY1 like pseudokinase 1. (839 aa)
clp1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (441 aa)
mib1Mindbomb E3 ubiquitin protein ligase 1. (1019 aa)
surf1SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (316 aa)
LOC102295856T-box transcription factor 6. (802 aa)
scyl3SCY1-like, kinase-like 3. (776 aa)
cln8CLN8 transmembrane ER and ERGIC protein. (288 aa)
phox2aPaired like homeobox 2A. (298 aa)
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (415 aa)
notch1Notch receptor 1b. (2411 aa)
gbx1Gastrulation brain homeobox 1. (321 aa)
tctn3DUF1619 domain-containing protein. (457 aa)
LOC102289249Notch receptor 1a. (2455 aa)
LOC102307791Homeobox C10a. (330 aa)
ENSHBUP00000004171DUF1619 domain-containing protein. (246 aa)
zc4h2Zinc finger, C4H2 domain containing. (225 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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