37 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102297268	Uncharacterized protein. (204 aa)
	LOC102303940	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (190 aa)
	fras1	Fraser extracellular matrix complex subunit 1. (3796 aa)
	LOC102307791	Homeobox C10a. (330 aa)
	tbx4	T-box transcription factor 4. (534 aa)
	rpgrip1l	RPGRIP1 like. (1074 aa)
	sall4	Spalt-like transcription factor 4. (1081 aa)
	LOC102312355	Mothers against decapentaplegic homolog. (606 aa)
	frem3	Fras1 related extracellular matrix 3. (3135 aa)
	tbx5	Uncharacterized protein. (529 aa)
	LOC102292622	Mothers against decapentaplegic homolog. (510 aa)
	ift140	Intraflagellar transport 140 homolog (Chlamydomonas). (1246 aa)
	fgf4	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (193 aa)
	LOC102311825	Homeobox protein engrailed-like. (284 aa)
	ENSHBUP00000013761	Secreted frizzled-related protein 2 like. (310 aa)
	med1	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1838 aa)
	wdpcp	WD repeat containing planar cell polarity effector. (698 aa)
	map3k20	Uncharacterized protein. (833 aa)
	sp9	Sp9 transcription factor. (439 aa)
	sfrp2	Secreted frizzled-related protein 2. (295 aa)
	LOC102310207	Homeobox protein engrailed-like. (292 aa)
	LOC102309260	Mothers against decapentaplegic homolog. (503 aa)
	ALX3	ALX homeobox 3. (367 aa)
	wdr19	WD repeat domain 19. (1321 aa)
	ift52	Intraflagellar transport 52 homolog (Chlamydomonas). (434 aa)
	ENSHBUP00000024870	Uncharacterized protein. (221 aa)
	LOC102295591	Growth arrest-specific 1b. (259 aa)
	ENSHBUP00000027534	T-box transcription factor 3b. (362 aa)
	fbxw4	F-box and WD repeat domain containing 4. (389 aa)
	LOC102296248	Protein kinase domain-containing protein. (668 aa)
	lef1	Lymphoid enhancer-binding factor 1. (398 aa)
	LOC102296924	Sp8 transcription factor b. (452 aa)
	LOC102293702	Dickkopf WNT signaling pathway inhibitor 1a. (253 aa)
	mks1	MKS transition zone complex subunit 1. (563 aa)
	msx1	Muscle segment homeobox 1a. (283 aa)
	tbx3	T-box transcription factor 3a. (715 aa)
	LOC102301626	FRAS1 related extracellular matrix 2b. (3112 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALX3	LOC102310207	ENSHBUP00000019988	ENSHBUP00000019005	ALX homeobox 3.	Homeobox protein engrailed-like.	0.493
ALX3	LOC102311825	ENSHBUP00000019988	ENSHBUP00000013316	ALX homeobox 3.	Homeobox protein engrailed-like.	0.493
ENSHBUP00000013761	LOC102293702	ENSHBUP00000013761	ENSHBUP00000032439	Secreted frizzled-related protein 2 like.	Dickkopf WNT signaling pathway inhibitor 1a.	0.478
ENSHBUP00000024870	LOC102297268	ENSHBUP00000024870	ENSHBUP00000001523	Uncharacterized protein.	Uncharacterized protein.	0.987
LOC102292622	LOC102296248	ENSHBUP00000008979	ENSHBUP00000030615	Mothers against decapentaplegic homolog.	Protein kinase domain-containing protein.	0.463
LOC102292622	LOC102309260	ENSHBUP00000008979	ENSHBUP00000019491	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.851
LOC102292622	LOC102312355	ENSHBUP00000008979	ENSHBUP00000006158	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.852
LOC102292622	lef1	ENSHBUP00000008979	ENSHBUP00000030690	Mothers against decapentaplegic homolog.	Lymphoid enhancer-binding factor 1.	0.938
LOC102292622	map3k20	ENSHBUP00000008979	ENSHBUP00000017218	Mothers against decapentaplegic homolog.	Uncharacterized protein.	0.463
LOC102293702	ENSHBUP00000013761	ENSHBUP00000032439	ENSHBUP00000013761	Dickkopf WNT signaling pathway inhibitor 1a.	Secreted frizzled-related protein 2 like.	0.478
LOC102293702	lef1	ENSHBUP00000032439	ENSHBUP00000030690	Dickkopf WNT signaling pathway inhibitor 1a.	Lymphoid enhancer-binding factor 1.	0.491
LOC102293702	sfrp2	ENSHBUP00000032439	ENSHBUP00000018215	Dickkopf WNT signaling pathway inhibitor 1a.	Secreted frizzled-related protein 2.	0.478
LOC102296248	LOC102292622	ENSHBUP00000030615	ENSHBUP00000008979	Protein kinase domain-containing protein.	Mothers against decapentaplegic homolog.	0.463
LOC102296248	LOC102309260	ENSHBUP00000030615	ENSHBUP00000019491	Protein kinase domain-containing protein.	Mothers against decapentaplegic homolog.	0.463
LOC102296248	LOC102312355	ENSHBUP00000030615	ENSHBUP00000006158	Protein kinase domain-containing protein.	Mothers against decapentaplegic homolog.	0.463
LOC102296248	map3k20	ENSHBUP00000030615	ENSHBUP00000017218	Protein kinase domain-containing protein.	Uncharacterized protein.	0.852
LOC102297268	ENSHBUP00000024870	ENSHBUP00000001523	ENSHBUP00000024870	Uncharacterized protein.	Uncharacterized protein.	0.987
LOC102301626	fras1	ENSHBUP00000000819	ENSHBUP00000003581	FRAS1 related extracellular matrix 2b.	Fraser extracellular matrix complex subunit 1.	0.919
LOC102301626	med1	ENSHBUP00000000819	ENSHBUP00000013910	FRAS1 related extracellular matrix 2b.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.435
LOC102309260	LOC102292622	ENSHBUP00000019491	ENSHBUP00000008979	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.851