114 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VAMP3	Vesicle associated membrane protein 3. (102 aa)
	syt12	Synaptotagmin XII. (429 aa)
	bcl2l1	BCL2 like 1. (233 aa)
	LOC102296541	Synaptoporin. (283 aa)
	LOC102310274	SV2 related protein b. (544 aa)
	LOC102298361	Multiple C2 domains, transmembrane 2b. (882 aa)
	syngr2	Synaptogyrin. (256 aa)
	LOC102289257	Wolfram syndrome 1a (wolframin). (1062 aa)
	TMEM163	Transmembrane protein 163a. (289 aa)
	LOC102293500	Multiple C2 domains, transmembrane 2a. (1029 aa)
	ATP6V0C	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (155 aa)
	LAMP5	Lysosomal associated membrane protein family member 5. (249 aa)
	LOC102301058	Synaptotagmin Ib. (408 aa)
	LOC102312683	Uncharacterized protein. (253 aa)
	LOC102297438	Synaptotagmin IXa. (563 aa)
	lrrk2	Leucine-rich repeat kinase 2. (2426 aa)
	renbp	Renin binding protein. (472 aa)
	tmem163	Transmembrane protein 163. (293 aa)
	LOC102297549	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (502 aa)
	LOC102311729	BH4_2 domain-containing protein. (226 aa)
	LOC102294849	Otoferlin b. (1696 aa)
	clta	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (232 aa)
	bsn	Bassoon (presynaptic cytomatrix protein) b. (3879 aa)
	SYN3	Synapsin III. (541 aa)
	LOC102295106	Aa_trans domain-containing protein. (522 aa)
	LOC102292315	Uncharacterized protein. (430 aa)
	cltb	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (212 aa)
	ENSHBUP00000026468	Uncharacterized protein. (200 aa)
	LOC102305081	Solute carrier family 32 member 1. (526 aa)
	LOC102289876	MFS domain-containing protein. (736 aa)
	ENSHBUP00000025682	C2 domain-containing protein. (174 aa)
	snapin	SNAP associated protein. (156 aa)
	fer1l6	Fer-1 like family member 6. (1662 aa)
	LOC102313368	Synaptic vesicle glycoprotein 2. (438 aa)
	syngr1	Synaptogyrin. (231 aa)
	LOC102292902	Uncharacterized protein. (1480 aa)
	LOC102291464	MFS domain-containing protein. (628 aa)
	stx16	Syntaxin 16; Belongs to the syntaxin family. (306 aa)
	ENSHBUP00000023853	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (639 aa)
	LOC102299390	Secretory carrier-associated membrane protein. (230 aa)
	LOC102313380	MARVEL domain-containing protein. (190 aa)
	UNC13C	Unc-13 homolog C. (2572 aa)
	SCAMP1-2	Secretory carrier-associated membrane protein. (343 aa)
	prrt1	Proline-rich transmembrane protein 1. (241 aa)
	gabra2	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (446 aa)
	LOC102310081	Synapsin IIa. (467 aa)
	sypl1	Synaptophysin-like 1. (239 aa)
	cplx3	Complexin 3b. (156 aa)
	LOC102300764	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (154 aa)
	LOC102304324	Uncharacterized protein. (228 aa)
	LOC102288711	Synaptic vesicle glycoprotein 2Ba. (693 aa)
	LOC102305513	Synaptophysin a. (321 aa)
	LOC102314167	Synaptophysin a. (308 aa)
	LOC102308188	Synaptogyrin. (237 aa)
	LOC102293940	Si:dkey-16l2.16. (224 aa)
	LOC102314286	Vesicle-associated membrane protein 1. (119 aa)
	LOC102288520	Solute carrier family 17 member 7a. (551 aa)
	LOC102303092	Synaptotagmin VIIa. (730 aa)
	LOC102314506	Uncharacterized protein. (4093 aa)
	LOC102296820	Synaptotagmin Vb. (419 aa)
	ATP6V1B2	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (520 aa)
	borcs5	BLOC-1 related complex subunit 5. (197 aa)
	vamp1	Zgc:92912. (125 aa)
	LOC102294262	Synapsin I. (635 aa)
	gad2	Glutamate decarboxylase 2. (584 aa)
	SLC17A6	Solute carrier family 17 member 6b. (541 aa)
	slc18a2	Solute carrier family 18 member 2. (516 aa)
	SYNGR3	Synaptogyrin. (232 aa)
	LOC102307135	Synaptotagmin VIIb. (677 aa)
	slc17a8	Solute carrier family 17 member 8. (585 aa)
	ENSHBUP00000011914	Uncharacterized protein. (72 aa)
	LOC102311443	Otoferlin a. (1960 aa)
	svop	SV2 related protein a. (552 aa)
	ENSHBUP00000004259	C2 domain-containing protein. (410 aa)
	ENSHBUP00000004267	Uncharacterized protein. (1094 aa)
	SCAMP1	Secretory carrier-associated membrane protein. (217 aa)
	LOC102296156	Si:dkey-32e23.4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (673 aa)
	ENSHBUP00000005684	MARVEL domain-containing protein. (126 aa)
	LOC102305767	Syntaxin 6; Belongs to the syntaxin family. (260 aa)
	LOC102294416	ATPase H+ transporting accessory protein 1b. (448 aa)
	ENSHBUP00000006433	Uncharacterized protein. (168 aa)
	LOC102288766	Synaptotagmin IIa. (428 aa)
	atp6ap2	ATPase H+ transporting accessory protein 2. (362 aa)
	ENSHBUP00000006778	Proline-rich transmembrane protein 2. (184 aa)
	ENSHBUP00000006967	ATPase H+ transporting V1 subunit F. (79 aa)
	SYNDIG1	Synapse differentiation inducing 1. (282 aa)
	stx10	Syntaxin 10. (247 aa)
	sv2a	Synaptic vesicle glycoprotein 2A. (737 aa)
	sv2c	Synaptic vesicle glycoprotein 2Ca. (733 aa)
	syn2	Uncharacterized protein. (812 aa)
	wfs1	Wolfram syndrome 1b (wolframin). (922 aa)
	mctp1	Multiple C2 domains, transmembrane 1a. (890 aa)
	UNC13B	Unc-13 homolog B. (1600 aa)
	slc17a6	Solute carrier family 17 member 6. (581 aa)
	syp	Synaptophysin b. (293 aa)
	ENSHBUP00000009810	Si:ch73-343g19.4. (98 aa)
	LOC102300384	Synaptotagmin Ia. (422 aa)
	rab35	RAB35, member RAS oncogene family b. (201 aa)
	sypl2	Synaptophysin-like 2a. (232 aa)
	LOC102307825	Si:dkey-102f14.5. (415 aa)
	DNM1L	Dynamin 1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (731 aa)
	SV2A	Synaptic vesicle glycoprotein 2A. (737 aa)
	LOC102294997	Secretory carrier-associated membrane protein. (227 aa)
	syt9	Uncharacterized protein. (527 aa)
	dtnbp1	Dystrobrevin binding protein 1b. (270 aa)
	LOC102293598	Uncharacterized protein. (252 aa)
	ENSHBUP00000001439	Aa_trans domain-containing protein. (408 aa)
	LOC102311919	Synaptogyrin. (224 aa)
	LOC102310084	MFS domain-containing protein. (581 aa)
	synpr	Synaptoporin. (303 aa)
	LOC102309598	MFS domain-containing protein. (353 aa)
	LOC102290622	Vesicle-associated membrane protein 2. (110 aa)
	LOC102302688	Synaptophysin-like 2b. (236 aa)
	UNC13A	Unc-13 homolog A. (1872 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP6V0C	ATP6V1B2	ENSHBUP00000031624	ENSHBUP00000016440	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.995
ATP6V0C	ENSHBUP00000006967	ENSHBUP00000031624	ENSHBUP00000006967	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	ATPase H+ transporting V1 subunit F.	0.995
ATP6V0C	LOC102294416	ENSHBUP00000031624	ENSHBUP00000006336	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	ATPase H+ transporting accessory protein 1b.	0.993
ATP6V0C	LOC102297549	ENSHBUP00000031624	ENSHBUP00000029931	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.995
ATP6V0C	LOC102300764	ENSHBUP00000031624	ENSHBUP00000018620	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.886
ATP6V0C	atp6ap2	ENSHBUP00000031624	ENSHBUP00000006584	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	ATPase H+ transporting accessory protein 2.	0.956
ATP6V1B2	ATP6V0C	ENSHBUP00000016440	ENSHBUP00000031624	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.995
ATP6V1B2	ENSHBUP00000001439	ENSHBUP00000016440	ENSHBUP00000001439	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	Aa_trans domain-containing protein.	0.504
ATP6V1B2	ENSHBUP00000006967	ENSHBUP00000016440	ENSHBUP00000006967	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	ATPase H+ transporting V1 subunit F.	0.998
ATP6V1B2	LOC102294416	ENSHBUP00000016440	ENSHBUP00000006336	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	ATPase H+ transporting accessory protein 1b.	0.995
ATP6V1B2	LOC102295106	ENSHBUP00000016440	ENSHBUP00000027707	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	Aa_trans domain-containing protein.	0.504
ATP6V1B2	LOC102297549	ENSHBUP00000016440	ENSHBUP00000029931	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.886
ATP6V1B2	LOC102300764	ENSHBUP00000016440	ENSHBUP00000018620	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.995
ATP6V1B2	LOC102305081	ENSHBUP00000016440	ENSHBUP00000026392	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	Solute carrier family 32 member 1.	0.504
ATP6V1B2	atp6ap2	ENSHBUP00000016440	ENSHBUP00000006584	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	ATPase H+ transporting accessory protein 2.	0.973
DNM1L	ENSHBUP00000023853	ENSHBUP00000000757	ENSHBUP00000023853	Dynamin 1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.851
DNM1L	LOC102290622	ENSHBUP00000000757	ENSHBUP00000034598	Dynamin 1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Vesicle-associated membrane protein 2.	0.544
DNM1L	LOC102296156	ENSHBUP00000000757	ENSHBUP00000011374	Dynamin 1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Si:dkey-32e23.4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.810
DNM1L	LOC102311729	ENSHBUP00000000757	ENSHBUP00000029517	Dynamin 1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	BH4_2 domain-containing protein.	0.651
DNM1L	LOC102314286	ENSHBUP00000000757	ENSHBUP00000017185	Dynamin 1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Vesicle-associated membrane protein 1.	0.544