68 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102300525	Uncharacterized protein. (773 aa)
	mphosph10	U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (678 aa)
	ebna1bp2	EBNA1 binding protein 2. (314 aa)
	fam207a	Family with sequence similarity 207 member A. (253 aa)
	ftsj3	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (855 aa)
	nop58	NOP58 ribonucleoprotein homolog (yeast). (536 aa)
	wdr12	Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (421 aa)
	nop56	NOP56 ribonucleoprotein homolog. (572 aa)
	pdcd11	Programmed cell death 11. (1806 aa)
	fcf1	FCF1 rRNA-processing protein. (187 aa)
	tsr1	TSR1 ribosome maturation factor. (831 aa)
	LOC102289960	Si:ch211-197l9.5. (770 aa)
	nol10	Nucleolar protein 10. (720 aa)
	krr1	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (386 aa)
	tbl3	Transducin (beta)-like 3. (927 aa)
	znf622	Zinc finger protein 622. (475 aa)
	utp11	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (254 aa)
	mrto4	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (239 aa)
	ENSHBUP00000025319	U3snoRNP10 domain-containing protein. (334 aa)
	ENSHBUP00000025310	BP28CT domain-containing protein. (335 aa)
	nop9	Uncharacterized protein. (613 aa)
	utp3	UTP3 small subunit processome component. (472 aa)
	xrcc5	X-ray repair complementing defective repair in Chinese hamster cells 5. (739 aa)
	bysl	Bystin-like. (435 aa)
	srfbp1	Uncharacterized protein. (539 aa)
	utp23	UTP23 small subunit processome component. (254 aa)
	wdr46	WD repeat domain 46. (598 aa)
	bms1	BMS1 ribosome biogenesis factor. (1198 aa)
	rrp7a	Ribosomal RNA processing 7 homolog A. (282 aa)
	noc2l	NOC2-like nucleolar associated transcriptional repressor. (748 aa)
	kri1	KRI1 homolog. (768 aa)
	UTP14C	UTP14C small subunit processome component. (735 aa)
	ngdn	Neuroguidin, EIF4E binding protein. (331 aa)
	ENSHBUP00000016877	Uncharacterized protein. (126 aa)
	prkdc	Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (3889 aa)
	utp6	UTP6 small subunit processome component. (595 aa)
	nop14	NOP14 nucleolar protein homolog (yeast). (862 aa)
	imp3	IMP U3 small nucleolar ribonucleoprotein 3. (183 aa)
	wdr74	WD repeat domain 74. (375 aa)
	utp25	UTP25 small subunit processor component. (762 aa)
	ENSHBUP00000014764	UTP18 small subunit processome component. (101 aa)
	dcaf13	Ddb1 and cul4 associated factor 13. (495 aa)
	emg1	EMG1 N1-specific pseudouridine methyltransferase. (254 aa)
	imp4	IMP U3 small nucleolar ribonucleoprotein 4. (291 aa)
	rpf1	Ribosome production factor 1 homolog. (349 aa)
	bop1	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (742 aa)
	utp4	UTP4 small subunit processome component. (684 aa)
	ENSHBUP00000010988	Zona pellucida glycoprotein d. (381 aa)
	rrp15	Ribosomal RNA processing 15 homolog. (244 aa)
	fbl	Fibrillarin. (315 aa)
	nsa2	NSA2 ribosome biogenesis homolog (S. cerevisiae). (291 aa)
	riok2	RIO kinase 2 (yeast). (527 aa)
	wdr36	WD repeat domain 36. (867 aa)
	utp20	UTP20 small subunit processome component. (2768 aa)
	nol6	Nucleolar protein 6. (1183 aa)
	eif6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (225 aa)
	LOC102311125	Premelanosome protein b. (529 aa)
	pes1	Pescadillo. (473 aa)
	hunk	Hormonally up-regulated Neu-associated kinase. (686 aa)
	ltv1	LTV1 ribosome biogenesis factor. (467 aa)
	mak16	Protein MAK16 homolog; Belongs to the MAK16 family. (278 aa)
	ENSHBUP00000004302	RIO kinase 1 (yeast). (344 aa)
	LOC102304338	PWP2 small subunit processome component. (935 aa)
	wdr3	WD repeat domain 3. (941 aa)
	riok3	Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (508 aa)
	rrp9	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (482 aa)
	rsl1d1	Ribosomal L1 domain containing 1. (359 aa)
	noc4l	Nucleolar complex associated 4 homolog. (530 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000004302	ENSHBUP00000010988	ENSHBUP00000004302	ENSHBUP00000010988	RIO kinase 1 (yeast).	Zona pellucida glycoprotein d.	0.635
ENSHBUP00000004302	ENSHBUP00000014764	ENSHBUP00000004302	ENSHBUP00000014764	RIO kinase 1 (yeast).	UTP18 small subunit processome component.	0.575
ENSHBUP00000004302	LOC102300525	ENSHBUP00000004302	ENSHBUP00000002565	RIO kinase 1 (yeast).	Uncharacterized protein.	0.570
ENSHBUP00000004302	LOC102304338	ENSHBUP00000004302	ENSHBUP00000004178	RIO kinase 1 (yeast).	PWP2 small subunit processome component.	0.679
ENSHBUP00000004302	UTP14C	ENSHBUP00000004302	ENSHBUP00000018939	RIO kinase 1 (yeast).	UTP14C small subunit processome component.	0.785
ENSHBUP00000004302	bms1	ENSHBUP00000004302	ENSHBUP00000020301	RIO kinase 1 (yeast).	BMS1 ribosome biogenesis factor.	0.852
ENSHBUP00000004302	bysl	ENSHBUP00000004302	ENSHBUP00000022570	RIO kinase 1 (yeast).	Bystin-like.	0.936
ENSHBUP00000004302	dcaf13	ENSHBUP00000004302	ENSHBUP00000013954	RIO kinase 1 (yeast).	Ddb1 and cul4 associated factor 13.	0.436
ENSHBUP00000004302	ebna1bp2	ENSHBUP00000004302	ENSHBUP00000035280	RIO kinase 1 (yeast).	EBNA1 binding protein 2.	0.610
ENSHBUP00000004302	emg1	ENSHBUP00000004302	ENSHBUP00000013118	RIO kinase 1 (yeast).	EMG1 N1-specific pseudouridine methyltransferase.	0.412
ENSHBUP00000004302	ftsj3	ENSHBUP00000004302	ENSHBUP00000034637	RIO kinase 1 (yeast).	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.671
ENSHBUP00000004302	imp3	ENSHBUP00000004302	ENSHBUP00000016476	RIO kinase 1 (yeast).	IMP U3 small nucleolar ribonucleoprotein 3.	0.865
ENSHBUP00000004302	imp4	ENSHBUP00000004302	ENSHBUP00000012486	RIO kinase 1 (yeast).	IMP U3 small nucleolar ribonucleoprotein 4.	0.442
ENSHBUP00000004302	kri1	ENSHBUP00000004302	ENSHBUP00000019078	RIO kinase 1 (yeast).	KRI1 homolog.	0.442
ENSHBUP00000004302	krr1	ENSHBUP00000004302	ENSHBUP00000028473	RIO kinase 1 (yeast).	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.635
ENSHBUP00000004302	ltv1	ENSHBUP00000004302	ENSHBUP00000005521	RIO kinase 1 (yeast).	LTV1 ribosome biogenesis factor.	0.999
ENSHBUP00000004302	mak16	ENSHBUP00000004302	ENSHBUP00000004683	RIO kinase 1 (yeast).	Protein MAK16 homolog; Belongs to the MAK16 family.	0.760
ENSHBUP00000004302	mphosph10	ENSHBUP00000004302	ENSHBUP00000035339	RIO kinase 1 (yeast).	U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.	0.929
ENSHBUP00000004302	mrto4	ENSHBUP00000004302	ENSHBUP00000026800	RIO kinase 1 (yeast).	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.546
ENSHBUP00000004302	ngdn	ENSHBUP00000004302	ENSHBUP00000017461	RIO kinase 1 (yeast).	Neuroguidin, EIF4E binding protein.	0.623