48 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102312576	Uncharacterized protein. (446 aa)
	tab3	TGF-beta activated kinase 1 (MAP3K7) binding protein 3. (626 aa)
	zbtb1	Zinc finger and BTB domain containing 1. (671 aa)
	zranb3	Zinc finger, RAN-binding domain containing 3. (1156 aa)
	atrip	Uncharacterized protein. (789 aa)
	tnfaip3	Tumor necrosis factor, alpha-induced protein 3. (818 aa)
	rad18	RAD18 E3 ubiquitin protein ligase. (453 aa)
	ubxn1	UBX domain protein 1. (311 aa)
	bag6	BCL2 associated athanogene 6. (1222 aa)
	otud7b	OTU deubiquitinase 7B. (920 aa)
	rnf168	Ring finger protein 168. (419 aa)
	LOC102302180	Uncharacterized protein. (471 aa)
	LOC102297582	RING-type domain-containing protein. (891 aa)
	ubl7	Ubiquitin-like 7b (bone marrow stromal cell-derived). (379 aa)
	rnf169	Ring finger protein 169. (585 aa)
	tab2	TGF-beta activated kinase 1 (MAP3K7) binding protein 2. (738 aa)
	LOC102295674	Proteasome 26S subunit, non-ATPase 4a. (377 aa)
	zranb1	Zinc finger, RAN-binding domain containing 1a. (712 aa)
	ENSHBUP00000016935	Uncharacterized protein. (656 aa)
	ENSHBUP00000016928	Poly [ADP-ribose] polymerase. (507 aa)
	RAD23B	RAD23 homolog B, nucleotide excision repair protein. (379 aa)
	sqstm1	Sequestosome 1. (426 aa)
	ZRANB1	Zinc finger RANBP2-type containing 1. (799 aa)
	abraxas2	Abraxas 2, BRISC complex subunit. (453 aa)
	optn	Optineurin. (528 aa)
	mindy1	MINDY lysine 48 deubiquitinase 1. (554 aa)
	rad23a	RAD23 homolog A, nucleotide excision repair protein a. (378 aa)
	prpf8	Pre-mRNA processing factor 8. (2333 aa)
	LOC102290917	Si:dkey-181m9.8. (661 aa)
	LOC102292797	Zgc:136908; Belongs to the AAA ATPase family. (806 aa)
	otud7a	OTU deubiquitinase 7A. (958 aa)
	sprtn	SprT-like N-terminal domain. (459 aa)
	mfsd11	Major facilitator superfamily domain containing 11. (461 aa)
	rnf31	Uncharacterized protein. (1107 aa)
	ufd1	Ubiquitin recognition factor in ER associated degradation 1. (310 aa)
	ENSHBUP00000011390	BRCA1/BRCA2-containing complex, subunit 3. (266 aa)
	babam2	BRISC and BRCA1 A complex member 2. (400 aa)
	mindy2	MINDY lysine 48 deubiquitinase 2. (590 aa)
	ENSHBUP00000008807	UBA domain-containing protein. (210 aa)
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	LOC102303748	BCL2 associated athanogene 6, like. (1165 aa)
	LOC102302150	hGDE_N domain-containing protein. (100 aa)
	sharpin	SHANK-associated RH domain interacting protein. (436 aa)
	agl	Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase. (1241 aa)
	LOC102296372	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. (524 aa)
	LOC102302267	Proteasome 26S subunit, non-ATPase 4b. (375 aa)
	ubqln4	Ubiquilin 4. (582 aa)
	abraxas1	Abraxas 1, BRCA1 A complex subunit. (346 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000008807	ENSHBUP00000011390	ENSHBUP00000008807	ENSHBUP00000011390	UBA domain-containing protein.	BRCA1/BRCA2-containing complex, subunit 3.	0.788
ENSHBUP00000008807	LOC102290917	ENSHBUP00000008807	ENSHBUP00000014196	UBA domain-containing protein.	Si:dkey-181m9.8.	0.525
ENSHBUP00000008807	LOC102292797	ENSHBUP00000008807	ENSHBUP00000013417	UBA domain-containing protein.	Zgc:136908; Belongs to the AAA ATPase family.	0.687
ENSHBUP00000008807	LOC102295674	ENSHBUP00000008807	ENSHBUP00000018983	UBA domain-containing protein.	Proteasome 26S subunit, non-ATPase 4a.	0.936
ENSHBUP00000008807	LOC102296372	ENSHBUP00000008807	ENSHBUP00000004954	UBA domain-containing protein.	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	0.668
ENSHBUP00000008807	LOC102297582	ENSHBUP00000008807	ENSHBUP00000022890	UBA domain-containing protein.	RING-type domain-containing protein.	0.525
ENSHBUP00000008807	LOC102302180	ENSHBUP00000008807	ENSHBUP00000025552	UBA domain-containing protein.	Uncharacterized protein.	0.715
ENSHBUP00000008807	LOC102302267	ENSHBUP00000008807	ENSHBUP00000003354	UBA domain-containing protein.	Proteasome 26S subunit, non-ATPase 4b.	0.936
ENSHBUP00000008807	LOC102303748	ENSHBUP00000008807	ENSHBUP00000007039	UBA domain-containing protein.	BCL2 associated athanogene 6, like.	0.617
ENSHBUP00000008807	RAD23B	ENSHBUP00000008807	ENSHBUP00000016595	UBA domain-containing protein.	RAD23 homolog B, nucleotide excision repair protein.	0.715
ENSHBUP00000008807	ZRANB1	ENSHBUP00000008807	ENSHBUP00000015132	UBA domain-containing protein.	Zinc finger RANBP2-type containing 1.	0.463
ENSHBUP00000008807	bag6	ENSHBUP00000008807	ENSHBUP00000026855	UBA domain-containing protein.	BCL2 associated athanogene 6.	0.617
ENSHBUP00000008807	mindy1	ENSHBUP00000008807	ENSHBUP00000014789	UBA domain-containing protein.	MINDY lysine 48 deubiquitinase 1.	0.428
ENSHBUP00000008807	mindy2	ENSHBUP00000008807	ENSHBUP00000010852	UBA domain-containing protein.	MINDY lysine 48 deubiquitinase 2.	0.428
ENSHBUP00000008807	optn	ENSHBUP00000008807	ENSHBUP00000015067	UBA domain-containing protein.	Optineurin.	0.668
ENSHBUP00000008807	otud7a	ENSHBUP00000008807	ENSHBUP00000012845	UBA domain-containing protein.	OTU deubiquitinase 7A.	0.463
ENSHBUP00000008807	otud7b	ENSHBUP00000008807	ENSHBUP00000026285	UBA domain-containing protein.	OTU deubiquitinase 7B.	0.463
ENSHBUP00000008807	rad18	ENSHBUP00000008807	ENSHBUP00000029081	UBA domain-containing protein.	RAD18 E3 ubiquitin protein ligase.	0.655
ENSHBUP00000008807	rad23a	ENSHBUP00000008807	ENSHBUP00000014459	UBA domain-containing protein.	RAD23 homolog A, nucleotide excision repair protein a.	0.715
ENSHBUP00000008807	rnf168	ENSHBUP00000008807	ENSHBUP00000026099	UBA domain-containing protein.	Ring finger protein 168.	0.465