(8 nodes) Vascular associated smooth muscle cell differentiation network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sgcb	Sarcoglycan, beta (dystrophin-associated glycoprotein). (310 aa)
	nfatc4	Nuclear factor of activated T cells 4. (849 aa)
	LOC102306136	Mesoderm posterior ba. (245 aa)
	ramp2	Receptor (G protein-coupled) activity modifying protein 2. (239 aa)
	LOC102303139	Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family. (471 aa)
	ednra	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (442 aa)
	SRF	Serum response factor. (597 aa)
	LOC102295114	MADS-box domain-containing protein. (503 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102295114	SRF	ENSHBUP00000030051	ENSHBUP00000027140	MADS-box domain-containing protein.	Serum response factor.	0.854
LOC102295114	nfatc4	ENSHBUP00000030051	ENSHBUP00000006073	MADS-box domain-containing protein.	Nuclear factor of activated T cells 4.	0.831
LOC102303139	ednra	ENSHBUP00000025175	ENSHBUP00000026154	Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family.	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	0.853
SRF	LOC102295114	ENSHBUP00000027140	ENSHBUP00000030051	Serum response factor.	MADS-box domain-containing protein.	0.854
SRF	nfatc4	ENSHBUP00000027140	ENSHBUP00000006073	Serum response factor.	Nuclear factor of activated T cells 4.	0.832
ednra	LOC102303139	ENSHBUP00000026154	ENSHBUP00000025175	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family.	0.853
nfatc4	LOC102295114	ENSHBUP00000006073	ENSHBUP00000030051	Nuclear factor of activated T cells 4.	MADS-box domain-containing protein.	0.831
nfatc4	SRF	ENSHBUP00000006073	ENSHBUP00000027140	Nuclear factor of activated T cells 4.	Serum response factor.	0.832