33 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nup58	Nucleoporin 58. (599 aa)
	LOC102314283	Transforming growth factor beta; Belongs to the TGF-beta family. (383 aa)
	tpr	Translocated promoter region b, nuclear basket protein. (2192 aa)
	NUP54	Nucleoporin 54. (621 aa)
	pkig	Protein kinase (cAMP-dependent, catalytic) inhibitor gamma. (78 aa)
	epm2a	EPM2A glucan phosphatase, laforin. (316 aa)
	mavs	CARD_2 domain-containing protein. (364 aa)
	LOC102291991	LisH domain-containing protein. (1041 aa)
	bag3	BCL2 associated athanogene 3. (535 aa)
	LOC102313692	Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
	LOC102298548	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (182 aa)
	ipo5	Karyopherin (importin) beta 3. (1093 aa)
	LOC102310018	Junction plakoglobin a. (728 aa)
	LOC102296327	Translocated promoter region a, nuclear basket protein. (1747 aa)
	LOC102292391	Uncharacterized protein. (161 aa)
	sirt6	Sirtuin 6. (351 aa)
	ubr5	Ubiquitin protein ligase E3 component n-recognin 5. (2426 aa)
	dmap1	DNA methyltransferase 1 associated protein 1. (481 aa)
	nkd1	NKD inhibitor of WNT signaling pathway 1. (448 aa)
	ect2	Epithelial cell transforming 2. (962 aa)
	nf1	Neurofibromin 1b. (2772 aa)
	ptpn5	Protein tyrosine phosphatase non-receptor type 5. (571 aa)
	rab23	RAB23, member RAS oncogene family. (204 aa)
	smo	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (825 aa)
	zc3h12a	Zinc finger CCCH-type containing 12A. (632 aa)
	ENSHBUP00000029217	ZPR1 zinc finger. (452 aa)
	chp1	Calcineurin-like EF-hand protein 1. (195 aa)
	LOC102312296	Uncharacterized protein. (672 aa)
	LOC102298879	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
	LOC102307672	Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (175 aa)
	LOC102306055	Si:dkey-206d17.12. (644 aa)
	LOC102309739	Calcineurin-like EF-hand protein 2. (245 aa)
	efcab7	EF-hand calcium binding domain 7. (610 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102296327	NUP54	ENSHBUP00000017617	ENSHBUP00000004619	Translocated promoter region a, nuclear basket protein.	Nucleoporin 54.	0.860
LOC102296327	nup58	ENSHBUP00000017617	ENSHBUP00000035401	Translocated promoter region a, nuclear basket protein.	Nucleoporin 58.	0.805
LOC102309739	efcab7	ENSHBUP00000031921	ENSHBUP00000033595	Calcineurin-like EF-hand protein 2.	EF-hand calcium binding domain 7.	0.463
LOC102309739	epm2a	ENSHBUP00000031921	ENSHBUP00000007520	Calcineurin-like EF-hand protein 2.	EPM2A glucan phosphatase, laforin.	0.437
NUP54	LOC102296327	ENSHBUP00000004619	ENSHBUP00000017617	Nucleoporin 54.	Translocated promoter region a, nuclear basket protein.	0.860
NUP54	ipo5	ENSHBUP00000004619	ENSHBUP00000013939	Nucleoporin 54.	Karyopherin (importin) beta 3.	0.825
NUP54	nup58	ENSHBUP00000004619	ENSHBUP00000035401	Nucleoporin 54.	Nucleoporin 58.	0.996
NUP54	tpr	ENSHBUP00000004619	ENSHBUP00000004218	Nucleoporin 54.	Translocated promoter region b, nuclear basket protein.	0.860
bag3	epm2a	ENSHBUP00000009944	ENSHBUP00000007520	BCL2 associated athanogene 3.	EPM2A glucan phosphatase, laforin.	0.419
chp1	efcab7	ENSHBUP00000029277	ENSHBUP00000033595	Calcineurin-like EF-hand protein 1.	EF-hand calcium binding domain 7.	0.463
chp1	epm2a	ENSHBUP00000029277	ENSHBUP00000007520	Calcineurin-like EF-hand protein 1.	EPM2A glucan phosphatase, laforin.	0.437
efcab7	LOC102309739	ENSHBUP00000033595	ENSHBUP00000031921	EF-hand calcium binding domain 7.	Calcineurin-like EF-hand protein 2.	0.463
efcab7	chp1	ENSHBUP00000033595	ENSHBUP00000029277	EF-hand calcium binding domain 7.	Calcineurin-like EF-hand protein 1.	0.463
epm2a	LOC102309739	ENSHBUP00000007520	ENSHBUP00000031921	EPM2A glucan phosphatase, laforin.	Calcineurin-like EF-hand protein 2.	0.437
epm2a	bag3	ENSHBUP00000007520	ENSHBUP00000009944	EPM2A glucan phosphatase, laforin.	BCL2 associated athanogene 3.	0.419
epm2a	chp1	ENSHBUP00000007520	ENSHBUP00000029277	EPM2A glucan phosphatase, laforin.	Calcineurin-like EF-hand protein 1.	0.437
ipo5	NUP54	ENSHBUP00000013939	ENSHBUP00000004619	Karyopherin (importin) beta 3.	Nucleoporin 54.	0.825
ipo5	nup58	ENSHBUP00000013939	ENSHBUP00000035401	Karyopherin (importin) beta 3.	Nucleoporin 58.	0.652
nup58	LOC102296327	ENSHBUP00000035401	ENSHBUP00000017617	Nucleoporin 58.	Translocated promoter region a, nuclear basket protein.	0.805
nup58	NUP54	ENSHBUP00000035401	ENSHBUP00000004619	Nucleoporin 58.	Nucleoporin 54.	0.996