STRINGSTRING
LOC102310312 LOC102310312 LOC102302840 LOC102302840 LOC102294683 LOC102294683 fam171a2 fam171a2 LOC102290339 LOC102290339 LOC102308075 LOC102308075 fam171a1 fam171a1 zyx zyx CUL3 CUL3 fhdc1 fhdc1 LOC102305107 LOC102305107 SRF SRF LOC102295114 LOC102295114
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102310312FH2 domain-containing protein. (1089 aa)
LOC102302840FH2 domain containing 4. (821 aa)
LOC102294683CULLIN_2 domain-containing protein; Belongs to the cullin family. (767 aa)
fam171a2Family with sequence similarity 171 member A2b. (828 aa)
LOC102290339Phosphatase and actin regulator. (597 aa)
LOC102308075FH2 domain containing 3. (782 aa)
fam171a1Family with sequence similarity 171 member A1. (897 aa)
zyxUncharacterized protein. (621 aa)
CUL3Cullin 3; Belongs to the cullin family. (766 aa)
fhdc1FH2 domain containing 1. (1186 aa)
LOC102305107Phosphatase and actin regulator. (599 aa)
SRFSerum response factor. (597 aa)
LOC102295114MADS-box domain-containing protein. (503 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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