STRINGSTRING
rb1 rb1 DDX5 DDX5 maml1 maml1 LOC102290018 LOC102290018 LOC102301210 LOC102301210 grem1 grem1 FGF6 FGF6 plekhm3 plekhm3 LOC102311462 LOC102311462 LOC102304054 LOC102304054 hinfp hinfp DDX17 DDX17 LOC102295114 LOC102295114 FGF6-2 FGF6-2 SRF SRF LOC102290847 LOC102290847 LOC102289636 LOC102289636
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rb1Retinoblastoma 1. (912 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (633 aa)
maml1Mastermind-like transcriptional coactivator 1. (972 aa)
LOC102290018Galectin. (136 aa)
LOC102301210Galectin. (135 aa)
grem1Gremlin 1a, DAN family BMP antagonist. (179 aa)
FGF6Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (208 aa)
plekhm3Pleckstrin homology domain containing, family M, member 3. (784 aa)
LOC102311462Uncharacterized protein; Belongs to the DEAD box helicase family. (652 aa)
LOC102304054DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (624 aa)
hinfpHistone H4 transcription factor. (492 aa)
DDX17DEAD-box helicase 17; Belongs to the DEAD box helicase family. (625 aa)
LOC102295114MADS-box domain-containing protein. (503 aa)
FGF6-2Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (207 aa)
SRFSerum response factor. (597 aa)
LOC102290847Galectin. (127 aa)
LOC102289636Zgc:112083. (509 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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