(12 nodes) Viral budding network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (437 aa)
	ENSHBUP00000003240	Si:dkey-185p13.1. (73 aa)
	mvb12a	MABP domain-containing protein. (286 aa)
	pdcd6ip	Programmed cell death 6 interacting protein. (840 aa)
	vps4a	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (436 aa)
	mvb12b	Multivesicular body subunit 12Ba. (294 aa)
	vta1	Vesicle (multivesicular body) trafficking 1. (253 aa)
	tsg101	Tumor susceptibility 101a. (390 aa)
	LOC102289963	Zgc:123278. (192 aa)
	lrsam1	Leucine rich repeat and sterile alpha motif containing 1. (737 aa)
	LOC102298630	Multivesicular body subunit 12Bb. (253 aa)
	ENSHBUP00000031094	Uncharacterized protein; Belongs to the AAA ATPase family. (304 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000003240	LOC102289963	ENSHBUP00000003240	ENSHBUP00000028342	Si:dkey-185p13.1.	Zgc:123278.	0.533
ENSHBUP00000003240	pdcd6ip	ENSHBUP00000003240	ENSHBUP00000016493	Si:dkey-185p13.1.	Programmed cell death 6 interacting protein.	0.810
ENSHBUP00000003240	tsg101	ENSHBUP00000003240	ENSHBUP00000028331	Si:dkey-185p13.1.	Tumor susceptibility 101a.	0.533
ENSHBUP00000003240	vta1	ENSHBUP00000003240	ENSHBUP00000027553	Si:dkey-185p13.1.	Vesicle (multivesicular body) trafficking 1.	0.981
ENSHBUP00000031094	LOC102289963	ENSHBUP00000031094	ENSHBUP00000028342	Uncharacterized protein; Belongs to the AAA ATPase family.	Zgc:123278.	0.533
ENSHBUP00000031094	VPS4B	ENSHBUP00000031094	ENSHBUP00000003195	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.831
ENSHBUP00000031094	pdcd6ip	ENSHBUP00000031094	ENSHBUP00000016493	Uncharacterized protein; Belongs to the AAA ATPase family.	Programmed cell death 6 interacting protein.	0.810
ENSHBUP00000031094	tsg101	ENSHBUP00000031094	ENSHBUP00000028331	Uncharacterized protein; Belongs to the AAA ATPase family.	Tumor susceptibility 101a.	0.533
ENSHBUP00000031094	vps4a	ENSHBUP00000031094	ENSHBUP00000021092	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.833
ENSHBUP00000031094	vta1	ENSHBUP00000031094	ENSHBUP00000027553	Uncharacterized protein; Belongs to the AAA ATPase family.	Vesicle (multivesicular body) trafficking 1.	0.983
LOC102289963	ENSHBUP00000003240	ENSHBUP00000028342	ENSHBUP00000003240	Zgc:123278.	Si:dkey-185p13.1.	0.533
LOC102289963	ENSHBUP00000031094	ENSHBUP00000028342	ENSHBUP00000031094	Zgc:123278.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.533
LOC102289963	LOC102298630	ENSHBUP00000028342	ENSHBUP00000030123	Zgc:123278.	Multivesicular body subunit 12Bb.	0.959
LOC102289963	VPS4B	ENSHBUP00000028342	ENSHBUP00000003195	Zgc:123278.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.533
LOC102289963	lrsam1	ENSHBUP00000028342	ENSHBUP00000029089	Zgc:123278.	Leucine rich repeat and sterile alpha motif containing 1.	0.796
LOC102289963	mvb12a	ENSHBUP00000028342	ENSHBUP00000013856	Zgc:123278.	MABP domain-containing protein.	0.978
LOC102289963	mvb12b	ENSHBUP00000028342	ENSHBUP00000025212	Zgc:123278.	Multivesicular body subunit 12Ba.	0.959
LOC102289963	pdcd6ip	ENSHBUP00000028342	ENSHBUP00000016493	Zgc:123278.	Programmed cell death 6 interacting protein.	0.935
LOC102289963	vps4a	ENSHBUP00000028342	ENSHBUP00000021092	Zgc:123278.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.533
LOC102289963	vta1	ENSHBUP00000028342	ENSHBUP00000027553	Zgc:123278.	Vesicle (multivesicular body) trafficking 1.	0.735