STRINGSTRING
ENSHBUP00000000014 ENSHBUP00000000014 HNRNPA0 HNRNPA0 LOC102302702 LOC102302702 ssb ssb pcid2 pcid2 alyref alyref ENSHBUP00000000398 ENSHBUP00000000398 LOC102310315 LOC102310315 srsf7 srsf7 ENSHBUP00000001166 ENSHBUP00000001166 EIF5AL1 EIF5AL1 nup153 nup153 SRSF3 SRSF3 ddx39a ddx39a ENSHBUP00000002785 ENSHBUP00000002785 thoc7 thoc7 nup107 nup107 ENSHBUP00000004062 ENSHBUP00000004062 tpr tpr LOC102305017 LOC102305017 NUP54 NUP54 nup188 nup188 ndc1 ndc1 snupn snupn nup160 nup160 rftn2 rftn2 rftn1 rftn1 qki qki ENSHBUP00000007056 ENSHBUP00000007056 mrpl18 mrpl18 rbm8a rbm8a thoc1 thoc1 LOC102302616 LOC102302616 nup88 nup88 nol6 nol6 ybx1 ybx1 gle1 gle1 LOC102302606 LOC102302606 nup85 nup85 rae1 rae1 nup93 nup93 nxf1 nxf1 PNPT1 PNPT1 casc3 casc3 eif4a3 eif4a3 LOC102301124 LOC102301124 LOC102298528 LOC102298528 LOC102294363 LOC102294363 nup42 nup42 kpnb1 kpnb1 phax phax polr2d polr2d fyttd1 fyttd1 ENSHBUP00000015737 ENSHBUP00000015737 ENSHBUP00000016048 ENSHBUP00000016048 ENSHBUP00000016099 ENSHBUP00000016099 igf2bp3 igf2bp3 cetn3 cetn3 alkbh5 alkbh5 NUP62 NUP62 LOC102303326 LOC102303326 LOC102304137 LOC102304137 ythdc1 ythdc1 pom121 pom121 LOC102304317 LOC102304317 LOC102296327 LOC102296327 TGFBR2 TGFBR2 hnrnpa3 hnrnpa3 LOC102310120 LOC102310120 LOC102296990 LOC102296990 seh1l seh1l DDX39A DDX39A TOMM20 TOMM20 NCBP1 NCBP1 LOC102313422 LOC102313422 nup155 nup155 LOC102293583 LOC102293583 xpo5 xpo5 LOC102305488 LOC102305488 LOC102313071 LOC102313071 sidt2 sidt2 LOC102289472 LOC102289472 ranbp2 ranbp2 nxt2 nxt2 igf2bp2 igf2bp2 slbp slbp thoc2 thoc2 ncbp2 ncbp2 dhx9 dhx9 sec13 sec13 nup133 nup133 LOC102313919 LOC102313919 xpo1 xpo1 chtop chtop thoc3 thoc3 nup58 nup58 mcm3ap mcm3ap poldip3 poldip3 xpot xpot nup50 nup50 LOC102296550 LOC102296550 LOC102308132 LOC102308132 ncbp3 ncbp3 nup214 nup214 sem1 sem1 LOC102309785 LOC102309785 LOC102306816 LOC102306816 eif5a2 eif5a2 thoc6 thoc6 fmr1 fmr1 upf3a upf3a ran ran nup43 nup43 nutf2 nutf2 thoc5 thoc5 LOC102292206 LOC102292206 sarnp sarnp
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSHBUP00000000014Uncharacterized protein. (218 aa)
HNRNPA0Heterogeneous nuclear ribonucleoprotein A0. (257 aa)
LOC102302702DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast). (487 aa)
ssbSmall RNA binding exonuclease protection factor La. (393 aa)
pcid2PCI domain containing 2. (377 aa)
alyrefRRM domain-containing protein. (265 aa)
ENSHBUP00000000398Uncharacterized protein. (265 aa)
LOC102310315Si:ch211-216l23.2. (424 aa)
srsf7Serine and arginine rich splicing factor 7a. (254 aa)
ENSHBUP00000001166Uncharacterized protein. (102 aa)
EIF5AL1Eukaryotic translation initiation factor 5A2. (197 aa)
nup153Nucleoporin 153. (1526 aa)
SRSF3Serine and arginine rich splicing factor 3. (171 aa)
ddx39aUncharacterized protein. (427 aa)
ENSHBUP00000002785Uncharacterized protein. (243 aa)
thoc7THO complex 7. (203 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (908 aa)
ENSHBUP00000004062TSC complex subunit 1b. (432 aa)
tprTranslocated promoter region b, nuclear basket protein. (2192 aa)
LOC102305017Heterogeneous nuclear ribonucleoprotein A1a. (333 aa)
NUP54Nucleoporin 54. (621 aa)
nup188Nucleoporin 188. (1632 aa)
ndc1NDC1 transmembrane nucleoporin. (663 aa)
snupnSnurportin 1. (373 aa)
nup160Nucleoporin 160. (1289 aa)
rftn2Raftlin family member 2. (433 aa)
rftn1Uncharacterized protein. (682 aa)
qkiQKI, KH domain containing, RNA binding a. (572 aa)
ENSHBUP00000007056Nucleoporin 37. (313 aa)
mrpl18Mitochondrial ribosomal protein L18. (189 aa)
rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (160 aa)
thoc1THO complex 1. (654 aa)
LOC102302616Insulin-like growth factor 2 mRNA binding protein 1. (639 aa)
nup88Nucleoporin 88. (719 aa)
nol6Nucleolar protein 6. (1183 aa)
ybx1Y box binding protein 1. (304 aa)
gle1GLE1 RNA export mediator. (717 aa)
LOC102302606Mago homolog, exon junction complex subunit. (147 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (540 aa)
rae1Ribonucleic acid export 1. (369 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
nxf1Zgc:153681. (639 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (770 aa)
casc3Casc3 exon junction complex subunit. (762 aa)
eif4a3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (406 aa)
LOC102301124Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (98 aa)
LOC102298528Translocase of outer mitochondrial membrane 20b. (146 aa)
LOC102294363QKI, KH domain containing, RNA binding b. (340 aa)
nup42Nucleoporin 42. (488 aa)
kpnb1Karyopherin (importin) beta 1. (876 aa)
phaxPhosphorylated adaptor for RNA export. (409 aa)
polr2dRPOL4c domain-containing protein. (509 aa)
fyttd1Uncharacterized protein. (318 aa)
ENSHBUP00000015737TFIIS N-terminal domain-containing protein. (661 aa)
ENSHBUP00000016048Uncharacterized protein. (505 aa)
ENSHBUP00000016099Peptidase S59 domain-containing protein. (193 aa)
igf2bp3Insulin-like growth factor 2 mRNA binding protein 3. (589 aa)
cetn3Centrin 3. (167 aa)
alkbh5AlkB homolog 5, RNA demethylase. (357 aa)
NUP62Nucleoporin 62. (562 aa)
LOC102303326Eukaryotic translation initiation factor 5A. (156 aa)
LOC102304137Stem-loop binding protein 2. (346 aa)
ythdc1YTH domain containing 1. (683 aa)
pom121POM121 transmembrane nucleoporin. (1177 aa)
LOC102304317Lymphoid-restricted membrane protein. (1511 aa)
LOC102296327Translocated promoter region a, nuclear basket protein. (1747 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (538 aa)
hnrnpa3Heterogeneous nuclear ribonucleoprotein A3. (334 aa)
LOC102310120Nucleophosmin 1b. (313 aa)
LOC102296990Exportin 1 (CRM1 homolog, yeast) b. (1071 aa)
seh1lSEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (351 aa)
DDX39ADExD-box helicase 39A. (427 aa)
TOMM20Translocase of outer mitochondrial membrane 20. (146 aa)
NCBP1Nuclear cap binding protein subunit 1. (795 aa)
LOC102313422Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (546 aa)
nup155Nucleoporin 155. (1365 aa)
LOC102293583Uncharacterized protein. (270 aa)
xpo5Exportin 5. (1236 aa)
LOC102305488RRM domain-containing protein. (168 aa)
LOC102313071Nucleophosmin 1a. (315 aa)
sidt2SID1 transmembrane family, member 2. (853 aa)
LOC102289472DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B. (225 aa)
ranbp2RAN binding protein 2. (3058 aa)
nxt2Nuclear transport factor 2-like export factor 2. (143 aa)
igf2bp2Insulin-like growth factor 2 mRNA binding protein 2a. (611 aa)
slbpSLBP_RNA_bind domain-containing protein. (278 aa)
thoc2THO complex 2. (1460 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (191 aa)
dhx9DEAH (Asp-Glu-Ala-His) box helicase 9. (1271 aa)
sec13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (331 aa)
nup133Nucleoporin 133. (1135 aa)
LOC102313919Zgc:193690. (483 aa)
xpo1Exportin 1 (CRM1 homolog, yeast) a. (1066 aa)
chtopChromatin target of PRMT1a. (241 aa)
thoc3THO complex 3. (322 aa)
nup58Nucleoporin 58. (599 aa)
mcm3apMinichromosome maintenance complex component 3 associated protein. (2105 aa)
poldip3Polymerase (DNA-directed), delta interacting protein 3. (581 aa)
xpotExportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (998 aa)
nup50Nucleoporin 50. (469 aa)
LOC102296550Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (653 aa)
LOC102308132Aly/REF export factor. (273 aa)
ncbp3Nuclear cap binding subunit 3. (544 aa)
nup214Uncharacterized protein. (1830 aa)
sem1SEM1 26S proteasome complex subunit. (70 aa)
LOC102309785Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (96 aa)
LOC102306816Raftlin, lipid raft linker 1a. (701 aa)
eif5a2Eukaryotic translation initiation factor 5A. (153 aa)
thoc6THO complex 6. (352 aa)
fmr1Fragile X mental retardation 1. (600 aa)
upf3aUPF3A regulator of nonsense mediated mRNA decay. (463 aa)
ranGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (243 aa)
nup43Nucleoporin 43. (372 aa)
nutf2Nuclear transport factor 2. (127 aa)
thoc5THO complex 5. (690 aa)
LOC102292206QKI, KH domain containing, RNA binding 2. (349 aa)
sarnpSAP domain containing ribonucleoprotein. (210 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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