STRINGSTRING
LOC102306769 LOC102306769 fancb fancb LOC102291906 LOC102291906 ubr5 ubr5 rnf169 rnf169 smchd1 smchd1 OTUB2 OTUB2 ercc6 ercc6 radx radx ogg1 ogg1 hmga2 hmga2 tp53bp1 tp53bp1 ENSHBUP00000001844 ENSHBUP00000001844 rmi2 rmi2 LOC102290288 LOC102290288 rif1 rif1 parpbp parpbp otub1 otub1 trip12 trip12 fbh1 fbh1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102306769ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (817 aa)
fancbFA complementation group B. (777 aa)
LOC102291906Mab-21 domain-containing protein. (516 aa)
ubr5Ubiquitin protein ligase E3 component n-recognin 5. (2426 aa)
rnf169Ring finger protein 169. (585 aa)
smchd1Structural maintenance of chromosomes flexible hinge domain containing 1. (1672 aa)
OTUB2OTU deubiquitinase, ubiquitin aldehyde binding 2. (251 aa)
ercc6Excision repair cross-complementation group 6. (1439 aa)
radxRPA1 related single stranded DNA binding protein. (843 aa)
ogg18-oxoguanine DNA glycosylase. (415 aa)
hmga2Uncharacterized protein. (114 aa)
tp53bp1Tumor protein p53 binding protein, 1. (1710 aa)
ENSHBUP00000001844Uncharacterized protein. (214 aa)
rmi2RecQ mediated genome instability 2. (146 aa)
LOC102290288Uncharacterized protein. (237 aa)
rif1Replication timing regulatory factor 1. (2354 aa)
parpbpPARP1 binding protein. (587 aa)
otub1Ubiquitin thioesterase. (279 aa)
trip12Thyroid hormone receptor interactor 12. (2007 aa)
fbh1F-box DNA helicase 1. (1076 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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