STRINGSTRING
LOC102303675 LOC102303675 hmga2 hmga2 thoc1 thoc1 tpt1 tpt1 tp53bp1 tp53bp1 ENSHBUP00000001844 ENSHBUP00000001844 rmi2 rmi2 LOC102301397 LOC102301397 LOC102290288 LOC102290288 cdkn2d cdkn2d rif1 rif1 kdm1a kdm1a ppp1r10 ppp1r10 parpbp parpbp LOC102304943 LOC102304943 fancb fancb LOC102310028 LOC102310028 LOC102306769 LOC102306769 LOC102288722 LOC102288722 bcl2l12 bcl2l12 xrcc1 xrcc1 CLUL1 CLUL1 fbh1 fbh1 usp47 usp47 yju2 yju2 snai2 snai2 ogg1 ogg1 radx radx marchf7 marchf7 psmd10 psmd10 ercc1 ercc1 LOC102291934 LOC102291934 ercc6 ercc6 nhlrc4 nhlrc4 OTUB2 OTUB2 rnf169 rnf169 ubr5 ubr5 ddias ddias chek2 chek2 triap1 triap1 LOC102291906 LOC102291906 smchd1 smchd1 ercc4 ercc4 LOC102312405 LOC102312405 trip12 trip12 otub1 otub1 shld2 shld2 clu clu sirt1 sirt1 tmem161a tmem161a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102303675Clusterin; Belongs to the clusterin family. (463 aa)
hmga2Uncharacterized protein. (114 aa)
thoc1THO complex 1. (654 aa)
tpt1Tumor protein, translationally-controlled 1; Belongs to the TCTP family. (170 aa)
tp53bp1Tumor protein p53 binding protein, 1. (1710 aa)
ENSHBUP00000001844Uncharacterized protein. (214 aa)
rmi2RecQ mediated genome instability 2. (146 aa)
LOC102301397Uncharacterized protein. (179 aa)
LOC102290288Uncharacterized protein. (237 aa)
cdkn2dCyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4). (164 aa)
rif1Replication timing regulatory factor 1. (2354 aa)
kdm1aLysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (827 aa)
ppp1r10Protein phosphatase 1, regulatory subunit 10. (807 aa)
parpbpPARP1 binding protein. (587 aa)
LOC102304943Atypical chemokine receptor 3a; Belongs to the G-protein coupled receptor 1 family. (380 aa)
fancbFA complementation group B. (777 aa)
LOC102310028Atypical chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family. (365 aa)
LOC102306769ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (817 aa)
LOC102288722Uncharacterized protein. (958 aa)
bcl2l12Si:ch73-248e21.1. (356 aa)
xrcc1X-ray repair complementing defective repair in Chinese hamster cells 1. (627 aa)
CLUL1Clusterin; Belongs to the clusterin family. (465 aa)
fbh1F-box DNA helicase 1. (1076 aa)
usp47Ubiquitin specific peptidase 47; Belongs to the peptidase C19 family. (1383 aa)
yju2YJU2 splicing factor homolog. (340 aa)
snai2Snail family zinc finger 2. (260 aa)
ogg18-oxoguanine DNA glycosylase. (415 aa)
radxRPA1 related single stranded DNA binding protein. (843 aa)
marchf7Membrane-associated ring finger (C3HC4) 7. (797 aa)
psmd10Proteasome 26S subunit, non-ATPase 10. (226 aa)
ercc1Excision repair cross-complementation group 1. (352 aa)
LOC102291934Uncharacterized protein. (181 aa)
ercc6Excision repair cross-complementation group 6. (1439 aa)
nhlrc4Tripartite motif containing 32. (693 aa)
OTUB2OTU deubiquitinase, ubiquitin aldehyde binding 2. (251 aa)
rnf169Ring finger protein 169. (585 aa)
ubr5Ubiquitin protein ligase E3 component n-recognin 5. (2426 aa)
ddiasUncharacterized protein. (786 aa)
chek2Checkpoint kinase 2. (521 aa)
triap1TP53 regulated inhibitor of apoptosis 1. (116 aa)
LOC102291906Mab-21 domain-containing protein. (516 aa)
smchd1Structural maintenance of chromosomes flexible hinge domain containing 1. (1672 aa)
ercc4Excision repair cross-complementation group 4. (899 aa)
LOC102312405ATPase family AAA domain containing 5a. (1808 aa)
trip12Thyroid hormone receptor interactor 12. (2007 aa)
otub1Ubiquitin thioesterase. (279 aa)
shld2Si:ch211-134m17.9. (753 aa)
cluClusterin; Belongs to the clusterin family. (491 aa)
sirt1Deacetylase sirtuin-type domain-containing protein. (715 aa)
tmem161aTransmembrane protein 161A. (496 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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