Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ELOF1 | POLR2E | ENSHBUP00000032955 | ENSHBUP00000009323 | Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. | RNA polymerase II subunit E. | 0.879 |
| ELOF1 | polr1b | ENSHBUP00000032955 | ENSHBUP00000028708 | Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.827 |
| ELOF1 | polr1c | ENSHBUP00000032955 | ENSHBUP00000015860 | Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. | RNA polymerase I and III subunit C. | 0.848 |
| ELOF1 | polr2h | ENSHBUP00000032955 | ENSHBUP00000005291 | Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.865 |
| ELOF1 | polr2k | ENSHBUP00000032955 | ENSHBUP00000022171 | Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. | Polymerase (RNA) II (DNA directed) polypeptide K. | 0.651 |
| ELOF1 | polr3k | ENSHBUP00000032955 | ENSHBUP00000002330 | Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.532 |
| ELOF1 | znrd1 | ENSHBUP00000032955 | ENSHBUP00000001211 | Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.493 |
| ENSHBUP00000005048 | ENSHBUP00000005062 | ENSHBUP00000005048 | ENSHBUP00000005062 | TAN domain-containing protein. | Uncharacterized protein. | 0.923 |
| ENSHBUP00000005048 | ENSHBUP00000011337 | ENSHBUP00000005048 | ENSHBUP00000011337 | TAN domain-containing protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | 0.500 |
| ENSHBUP00000005048 | LOC102301389 | ENSHBUP00000005048 | ENSHBUP00000004322 | TAN domain-containing protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | 0.500 |
| ENSHBUP00000005048 | LOC102313308 | ENSHBUP00000005048 | ENSHBUP00000029285 | TAN domain-containing protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | 0.500 |
| ENSHBUP00000005048 | cdkn2aip | ENSHBUP00000005048 | ENSHBUP00000001592 | TAN domain-containing protein. | CDKN2A interacting protein. | 0.403 |
| ENSHBUP00000005048 | mdm2 | ENSHBUP00000005048 | ENSHBUP00000002884 | TAN domain-containing protein. | MDM2 proto-oncogene. | 0.890 |
| ENSHBUP00000005048 | poli | ENSHBUP00000005048 | ENSHBUP00000025497 | TAN domain-containing protein. | Polymerase (DNA directed) iota. | 0.612 |
| ENSHBUP00000005062 | ENSHBUP00000005048 | ENSHBUP00000005062 | ENSHBUP00000005048 | Uncharacterized protein. | TAN domain-containing protein. | 0.923 |
| ENSHBUP00000005062 | ENSHBUP00000011337 | ENSHBUP00000005062 | ENSHBUP00000011337 | Uncharacterized protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | 0.500 |
| ENSHBUP00000005062 | LOC102301389 | ENSHBUP00000005062 | ENSHBUP00000004322 | Uncharacterized protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | 0.500 |
| ENSHBUP00000005062 | LOC102313308 | ENSHBUP00000005062 | ENSHBUP00000029285 | Uncharacterized protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | 0.500 |
| ENSHBUP00000005062 | cdkn2aip | ENSHBUP00000005062 | ENSHBUP00000001592 | Uncharacterized protein. | CDKN2A interacting protein. | 0.403 |
| ENSHBUP00000005062 | mdm2 | ENSHBUP00000005062 | ENSHBUP00000002884 | Uncharacterized protein. | MDM2 proto-oncogene. | 0.890 |
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