45 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	noc2l	NOC2-like nucleolar associated transcriptional repressor. (748 aa)
	UTP14C	UTP14C small subunit processome component. (735 aa)
	utp6	UTP6 small subunit processome component. (595 aa)
	nop14	NOP14 nucleolar protein homolog (yeast). (862 aa)
	imp3	IMP U3 small nucleolar ribonucleoprotein 3. (183 aa)
	ENSHBUP00000014764	UTP18 small subunit processome component. (101 aa)
	emg1	EMG1 N1-specific pseudouridine methyltransferase. (254 aa)
	imp4	IMP U3 small nucleolar ribonucleoprotein 4. (291 aa)
	noc4l	Nucleolar complex associated 4 homolog. (530 aa)
	rrp9	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (482 aa)
	riok3	Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (508 aa)
	LOC102300525	Uncharacterized protein. (773 aa)
	pin4	Peptidyl-prolyl cis-trans isomerase. (127 aa)
	wdr3	WD repeat domain 3. (941 aa)
	ENSHBUP00000004302	RIO kinase 1 (yeast). (344 aa)
	mak16	Protein MAK16 homolog; Belongs to the MAK16 family. (278 aa)
	ltv1	LTV1 ribosome biogenesis factor. (467 aa)
	hunk	Hormonally up-regulated Neu-associated kinase. (686 aa)
	pes1	Pescadillo. (473 aa)
	LOC102311125	Premelanosome protein b. (529 aa)
	nol6	Nucleolar protein 6. (1183 aa)
	utp20	UTP20 small subunit processome component. (2768 aa)
	wdr36	WD repeat domain 36. (867 aa)
	riok2	RIO kinase 2 (yeast). (527 aa)
	nsa2	NSA2 ribosome biogenesis homolog (S. cerevisiae). (291 aa)
	rrp15	Ribosomal RNA processing 15 homolog. (244 aa)
	rsl24d1	Ribosomal L24 domain containing 1. (164 aa)
	bop1	Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (742 aa)
	mphosph10	U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (678 aa)
	fam207a	Family with sequence similarity 207 member A. (253 aa)
	fbxw12	Si:ch73-142c19.1. (474 aa)
	wdr12	Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (421 aa)
	fcf1	FCF1 rRNA-processing protein. (187 aa)
	tsr1	TSR1 ribosome maturation factor. (831 aa)
	LOC102289960	Si:ch211-197l9.5. (770 aa)
	fbxw9	F-box and WD repeat domain containing 9. (576 aa)
	nol10	Nucleolar protein 10. (720 aa)
	mrto4	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (239 aa)
	cmss1	Cms1 ribosomal small subunit homolog. (290 aa)
	nop9	Uncharacterized protein. (613 aa)
	utp3	UTP3 small subunit processome component. (472 aa)
	bysl	Bystin-like. (435 aa)
	nob1	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (407 aa)
	utp23	UTP23 small subunit processome component. (254 aa)
	rrp7a	Ribosomal RNA processing 7 homolog A. (282 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000004302	ENSHBUP00000014764	ENSHBUP00000004302	ENSHBUP00000014764	RIO kinase 1 (yeast).	UTP18 small subunit processome component.	0.575
ENSHBUP00000004302	LOC102300525	ENSHBUP00000004302	ENSHBUP00000002565	RIO kinase 1 (yeast).	Uncharacterized protein.	0.570
ENSHBUP00000004302	UTP14C	ENSHBUP00000004302	ENSHBUP00000018939	RIO kinase 1 (yeast).	UTP14C small subunit processome component.	0.785
ENSHBUP00000004302	bysl	ENSHBUP00000004302	ENSHBUP00000022570	RIO kinase 1 (yeast).	Bystin-like.	0.936
ENSHBUP00000004302	emg1	ENSHBUP00000004302	ENSHBUP00000013118	RIO kinase 1 (yeast).	EMG1 N1-specific pseudouridine methyltransferase.	0.412
ENSHBUP00000004302	imp3	ENSHBUP00000004302	ENSHBUP00000016476	RIO kinase 1 (yeast).	IMP U3 small nucleolar ribonucleoprotein 3.	0.865
ENSHBUP00000004302	imp4	ENSHBUP00000004302	ENSHBUP00000012486	RIO kinase 1 (yeast).	IMP U3 small nucleolar ribonucleoprotein 4.	0.442
ENSHBUP00000004302	ltv1	ENSHBUP00000004302	ENSHBUP00000005521	RIO kinase 1 (yeast).	LTV1 ribosome biogenesis factor.	0.999
ENSHBUP00000004302	mak16	ENSHBUP00000004302	ENSHBUP00000004683	RIO kinase 1 (yeast).	Protein MAK16 homolog; Belongs to the MAK16 family.	0.760
ENSHBUP00000004302	mphosph10	ENSHBUP00000004302	ENSHBUP00000035339	RIO kinase 1 (yeast).	U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.	0.929
ENSHBUP00000004302	mrto4	ENSHBUP00000004302	ENSHBUP00000026800	RIO kinase 1 (yeast).	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.546
ENSHBUP00000004302	nob1	ENSHBUP00000004302	ENSHBUP00000022353	RIO kinase 1 (yeast).	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.999
ENSHBUP00000004302	noc2l	ENSHBUP00000004302	ENSHBUP00000019267	RIO kinase 1 (yeast).	NOC2-like nucleolar associated transcriptional repressor.	0.442
ENSHBUP00000004302	noc4l	ENSHBUP00000004302	ENSHBUP00000000153	RIO kinase 1 (yeast).	Nucleolar complex associated 4 homolog.	0.500
ENSHBUP00000004302	nol10	ENSHBUP00000004302	ENSHBUP00000029990	RIO kinase 1 (yeast).	Nucleolar protein 10.	0.810
ENSHBUP00000004302	nol6	ENSHBUP00000004302	ENSHBUP00000008542	RIO kinase 1 (yeast).	Nucleolar protein 6.	0.442
ENSHBUP00000004302	nop14	ENSHBUP00000004302	ENSHBUP00000016546	RIO kinase 1 (yeast).	NOP14 nucleolar protein homolog (yeast).	0.779
ENSHBUP00000004302	nop9	ENSHBUP00000004302	ENSHBUP00000022999	RIO kinase 1 (yeast).	Uncharacterized protein.	0.444
ENSHBUP00000004302	nsa2	ENSHBUP00000004302	ENSHBUP00000009404	RIO kinase 1 (yeast).	NSA2 ribosome biogenesis homolog (S. cerevisiae).	0.521
ENSHBUP00000004302	pes1	ENSHBUP00000004302	ENSHBUP00000006552	RIO kinase 1 (yeast).	Pescadillo.	0.430