(98 nodes) SWI/SNF superfamily-type complex network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	phf10	PHD finger protein 10. (408 aa)
	LOC102304724	Requiem_N domain-containing protein. (347 aa)
	znhit1	Zinc finger, HIT-type containing 1. (153 aa)
	LOC102303567	Uncharacterized protein. (90 aa)
	ino80c	INO80 complex subunit C. (203 aa)
	cecr2	CECR2 histone acetyl-lysine reader. (1622 aa)
	brd9	Bromodomain containing 9. (615 aa)
	mta3	Metastasis associated 1 family, member 3. (700 aa)
	LOC102309385	D4, zinc and double PHD fingers family 2. (353 aa)
	LOC102308375	Retinoblastoma binding protein 4, like. (427 aa)
	smarcc2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1050 aa)
	LOC102303549	Zgc:103508. (205 aa)
	LOC102295435	AT rich interactive domain 1Aa (SWI-like). (2299 aa)
	LOC102294944	BAF chromatin remodeling complex subunit BCL11A b. (812 aa)
	LOC102308589	Ash1 (absent, small, or homeotic)-like (Drosophila). (2893 aa)
	wbp1l	WW domain binding protein 1-like b. (490 aa)
	LOC102310951	Chromodomain helicase DNA binding protein 3. (2129 aa)
	ino80e	INO80 complex subunit E. (236 aa)
	LOC102301416	LRRcap domain-containing protein. (244 aa)
	smarcc1	Uncharacterized protein. (1135 aa)
	smarcd3	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b. (544 aa)
	LOC102305636	Retinoblastoma binding protein 4. (424 aa)
	ep400	E1A binding protein p400. (2908 aa)
	LOC102306048	Polybromo 1. (1517 aa)
	chd5	Chromodomain helicase DNA binding protein 5. (1804 aa)
	dpf2	Uncharacterized protein. (406 aa)
	LOC102313260	AT rich interactive domain 1Ab (SWI-like). (2306 aa)
	smarca5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (790 aa)
	LOC102294670	Si:dkey-226m8.10. (270 aa)
	LOC102295833	Uncharacterized protein. (356 aa)
	tfpt	TCF3 (E2A) fusion partner. (199 aa)
	nfrkb	Nuclear factor related to kappaB binding protein. (1274 aa)
	dpf1	D4, zinc and double PHD fingers family 1. (475 aa)
	brd8	Si:ch211-59d17.3. (796 aa)
	mpnd	MPN domain containing. (454 aa)
	bcl11a	BAF chromatin remodeling complex subunit BCL11A. (915 aa)
	ing3	Inhibitor of growth protein. (420 aa)
	aire	Autoimmune regulator. (499 aa)
	chrac1	Chromatin accessibility complex subunit 1. (192 aa)
	BAZ1A	Bromodomain adjacent to zinc finger domain 1A. (1147 aa)
	LOC102300213	Zinc finger protein 296. (610 aa)
	LOC102296485	Si:ch73-290k24.6. (845 aa)
	BCL11B	BAF chromatin remodeling complex subunit BCL11B. (836 aa)
	smarcd1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (514 aa)
	uchl5	Ubiquitin carboxyl-terminal hydrolase. (329 aa)
	smarcd2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2. (503 aa)
	srcap	Snf2-related CREBBP activator protein. (4216 aa)
	ENSHBUP00000003488	Uncharacterized protein. (79 aa)
	ss18	SS18 subunit of BAF chromatin remodeling complex. (379 aa)
	actr8	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (643 aa)
	ENSHBUP00000004241	Polymerase (DNA directed), epsilon 3 (p17 subunit). (147 aa)
	actr6	Actin related protein 6; Belongs to the actin family. (396 aa)
	gatad2b	GATA zinc finger domain containing 2B. (649 aa)
	anp32e	Acidic (leucine-rich) nuclear phosphoprotein 32 family, member E. (242 aa)
	LOC102303710	Uncharacterized protein. (116 aa)
	LOC102312342	SAP domain-containing protein. (374 aa)
	bicra	BRD4 interacting chromatin remodeling complex associated protein. (1775 aa)
	ino80b	INO80 complex subunit B. (342 aa)
	LOC102297490	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (479 aa)
	gatad2a	GATA zinc finger domain containing 2Ab. (666 aa)
	wbp1	Uncharacterized protein. (529 aa)
	LOC102299420	AT rich interactive domain 1B (SWI1-like). (2215 aa)
	LOC102297585	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (373 aa)
	actr5	Actin related protein 5; Belongs to the actin family. (624 aa)
	bcl7a	BAF chromatin remodeling complex subunit BCL7A. (199 aa)
	arid2	AT rich interactive domain 2 (ARID, RFX-like). (1702 aa)
	SS18L1	SS18L1 subunit of BAF chromatin remodeling complex. (415 aa)
	LOC102314196	Remodeling and spacing factor 1b, tandem duplicate 1. (1592 aa)
	mta2	Metastasis associated 1 family, member 2. (663 aa)
	LOC102309383	Uncharacterized protein. (186 aa)
	baz1b	Bromodomain adjacent to zinc finger domain, 1B. (1641 aa)
	BPTF	Bromodomain PHD finger transcription factor. (2657 aa)
	LOC102294319	Im:7142702. (837 aa)
	chd4	Uncharacterized protein. (1812 aa)
	mta1	Metastasis associated 1. (638 aa)
	LOC102309979	Bromodomain containing 8. (822 aa)
	smarce1	HMG box domain-containing protein. (427 aa)
	dmap1	DNA methyltransferase 1 associated protein 1. (481 aa)
	LOC102296685	Polybromo 1, like. (1639 aa)
	LOC102300108	WW domain binding protein 1. (284 aa)
	ercc6	Excision repair cross-complementation group 6. (1439 aa)
	LOC102297349	D4, zinc and double PHD fingers, family 3. (387 aa)
	ino80	INO80 complex ATPase subunit. (1497 aa)
	actl6a	Actin-like 6A; Belongs to the actin family. (432 aa)
	LOC102297072	GATA zinc finger domain containing 2A. (736 aa)
	LOC102305576	Bromodomain PHD finger transcription factor. (3439 aa)
	brd7	Bromodomain containing 7. (620 aa)
	banf1	Barrier to autointegration factor 1. (90 aa)
	LOC102307082	Uncharacterized protein. (250 aa)
	hmgxb4	HMG box domain containing 4a. (591 aa)
	ENSHBUP00000018670	Uncharacterized protein. (129 aa)
	ino80d	INO80 complex subunit Da. (1007 aa)
	LOC102312643	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b. (947 aa)
	ENSHBUP00000017358	Uncharacterized protein. (604 aa)
	mybbp1a	MYB binding protein (P160) 1a. (1274 aa)
	LOC102301393	WD_REPEATS_REGION domain-containing protein. (426 aa)
	ENSHBUP00000016781	ARID domain-containing protein. (1385 aa)
	LOC102291041	Chromodomain helicase DNA binding protein 4a. (1861 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAZ1A	ENSHBUP00000004241	ENSHBUP00000022238	ENSHBUP00000004241	Bromodomain adjacent to zinc finger domain 1A.	Polymerase (DNA directed), epsilon 3 (p17 subunit).	0.967
BAZ1A	LOC102291041	ENSHBUP00000022238	ENSHBUP00000016597	Bromodomain adjacent to zinc finger domain 1A.	Chromodomain helicase DNA binding protein 4a.	0.603
BAZ1A	LOC102301393	ENSHBUP00000022238	ENSHBUP00000016818	Bromodomain adjacent to zinc finger domain 1A.	WD_REPEATS_REGION domain-containing protein.	0.426
BAZ1A	LOC102305636	ENSHBUP00000022238	ENSHBUP00000030240	Bromodomain adjacent to zinc finger domain 1A.	Retinoblastoma binding protein 4.	0.426
BAZ1A	LOC102308375	ENSHBUP00000022238	ENSHBUP00000034610	Bromodomain adjacent to zinc finger domain 1A.	Retinoblastoma binding protein 4, like.	0.426
BAZ1A	LOC102310951	ENSHBUP00000022238	ENSHBUP00000033178	Bromodomain adjacent to zinc finger domain 1A.	Chromodomain helicase DNA binding protein 3.	0.603
BAZ1A	LOC102312342	ENSHBUP00000022238	ENSHBUP00000007766	Bromodomain adjacent to zinc finger domain 1A.	SAP domain-containing protein.	0.721
BAZ1A	aire	ENSHBUP00000022238	ENSHBUP00000022752	Bromodomain adjacent to zinc finger domain 1A.	Autoimmune regulator.	0.603
BAZ1A	baz1b	ENSHBUP00000022238	ENSHBUP00000012946	Bromodomain adjacent to zinc finger domain 1A.	Bromodomain adjacent to zinc finger domain, 1B.	0.524
BAZ1A	cecr2	ENSHBUP00000022238	ENSHBUP00000014678	Bromodomain adjacent to zinc finger domain 1A.	CECR2 histone acetyl-lysine reader.	0.689
BAZ1A	chd4	ENSHBUP00000022238	ENSHBUP00000014080	Bromodomain adjacent to zinc finger domain 1A.	Uncharacterized protein.	0.603
BAZ1A	chd5	ENSHBUP00000022238	ENSHBUP00000029151	Bromodomain adjacent to zinc finger domain 1A.	Chromodomain helicase DNA binding protein 5.	0.603
BAZ1A	chrac1	ENSHBUP00000022238	ENSHBUP00000022518	Bromodomain adjacent to zinc finger domain 1A.	Chromatin accessibility complex subunit 1.	0.934
BAZ1A	ep400	ENSHBUP00000022238	ENSHBUP00000029411	Bromodomain adjacent to zinc finger domain 1A.	E1A binding protein p400.	0.610
BAZ1A	ercc6	ENSHBUP00000022238	ENSHBUP00000020553	Bromodomain adjacent to zinc finger domain 1A.	Excision repair cross-complementation group 6.	0.788
BAZ1A	ino80	ENSHBUP00000022238	ENSHBUP00000020298	Bromodomain adjacent to zinc finger domain 1A.	INO80 complex ATPase subunit.	0.605
BAZ1A	mybbp1a	ENSHBUP00000022238	ENSHBUP00000017306	Bromodomain adjacent to zinc finger domain 1A.	MYB binding protein (P160) 1a.	0.759
BAZ1A	smarca5	ENSHBUP00000022238	ENSHBUP00000026659	Bromodomain adjacent to zinc finger domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.989
BAZ1A	srcap	ENSHBUP00000022238	ENSHBUP00000003102	Bromodomain adjacent to zinc finger domain 1A.	Snf2-related CREBBP activator protein.	0.610
BCL11B	LOC102291041	ENSHBUP00000001027	ENSHBUP00000016597	BAF chromatin remodeling complex subunit BCL11B.	Chromodomain helicase DNA binding protein 4a.	0.466