(35 nodes) SNF2, N-terminal network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	smarca5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (790 aa)
	atrx	ATRX chromatin remodeler. (1871 aa)
	SMARCAL1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (899 aa)
	ENSHBUP00000002926	ATRX chromatin remodeler, like. (1369 aa)
	btaf1	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated. (1859 aa)
	srcap	Snf2-related CREBBP activator protein. (4216 aa)
	LOC102303826	Uncharacterized protein. (1657 aa)
	smarca2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1588 aa)
	rad54l	RAD54 like. (739 aa)
	ercc6l	Excision repair cross-complementation group 6-like. (1228 aa)
	hells	Helicase, lymphoid specific. (854 aa)
	shprh	SNF2 histone linker PHD RING helicase. (1661 aa)
	hltf	Helicase-like transcription factor. (968 aa)
	chd4	Uncharacterized protein. (1812 aa)
	rad54b	RAD54 homolog B. (935 aa)
	chd2	Chromodomain helicase DNA binding protein 2. (1811 aa)
	LOC102291041	Chromodomain helicase DNA binding protein 4a. (1861 aa)
	LOC102314191	Uncharacterized protein. (1505 aa)
	chd7	Chromodomain helicase DNA binding protein 7. (3316 aa)
	chd9	Chromodomain helicase DNA binding protein 9. (2898 aa)
	ino80	INO80 complex ATPase subunit. (1497 aa)
	ercc6	Excision repair cross-complementation group 6. (1439 aa)
	chd8	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2536 aa)
	ttf2	Transcription termination factor, RNA polymerase II. (1142 aa)
	ercc6l2	Excision repair cross-complementation group 6-like 2. (1535 aa)
	chd1	Chromodomain helicase DNA binding protein 1. (1521 aa)
	chd1l	Chromodomain helicase DNA binding protein 1-like. (994 aa)
	smarcad1	Uncharacterized protein. (1053 aa)
	LOC102299406	RAD54 like 2. (1506 aa)
	chd5	Chromodomain helicase DNA binding protein 5. (1804 aa)
	ep400	E1A binding protein p400. (2908 aa)
	LOC102308233	Chromodomain helicase DNA binding protein 6. (3612 aa)
	zranb3	Zinc finger, RAN-binding domain containing 3. (1156 aa)
	LOC102310951	Chromodomain helicase DNA binding protein 3. (2129 aa)
	smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a. (1660 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000002926	btaf1	ENSHBUP00000002926	ENSHBUP00000002927	ATRX chromatin remodeler, like.	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.	0.488
ENSHBUP00000002926	rad54b	ENSHBUP00000002926	ENSHBUP00000014198	ATRX chromatin remodeler, like.	RAD54 homolog B.	0.575
ENSHBUP00000002926	rad54l	ENSHBUP00000002926	ENSHBUP00000006308	ATRX chromatin remodeler, like.	RAD54 like.	0.555
ENSHBUP00000002926	smarcad1	ENSHBUP00000002926	ENSHBUP00000027683	ATRX chromatin remodeler, like.	Uncharacterized protein.	0.517
ENSHBUP00000002926	ttf2	ENSHBUP00000002926	ENSHBUP00000023019	ATRX chromatin remodeler, like.	Transcription termination factor, RNA polymerase II.	0.439
LOC102291041	LOC102303826	ENSHBUP00000016597	ENSHBUP00000004080	Chromodomain helicase DNA binding protein 4a.	Uncharacterized protein.	0.435
LOC102291041	LOC102310951	ENSHBUP00000016597	ENSHBUP00000033178	Chromodomain helicase DNA binding protein 4a.	Chromodomain helicase DNA binding protein 3.	0.432
LOC102291041	btaf1	ENSHBUP00000016597	ENSHBUP00000002927	Chromodomain helicase DNA binding protein 4a.	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.	0.432
LOC102291041	chd5	ENSHBUP00000016597	ENSHBUP00000029151	Chromodomain helicase DNA binding protein 4a.	Chromodomain helicase DNA binding protein 5.	0.432
LOC102291041	ercc6	ENSHBUP00000016597	ENSHBUP00000020553	Chromodomain helicase DNA binding protein 4a.	Excision repair cross-complementation group 6.	0.623
LOC102291041	smarca2	ENSHBUP00000016597	ENSHBUP00000005200	Chromodomain helicase DNA binding protein 4a.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.	0.435
LOC102291041	smarca4	ENSHBUP00000016597	ENSHBUP00000033823	Chromodomain helicase DNA binding protein 4a.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a.	0.435
LOC102291041	smarca5	ENSHBUP00000016597	ENSHBUP00000026659	Chromodomain helicase DNA binding protein 4a.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.424
LOC102291041	smarcad1	ENSHBUP00000016597	ENSHBUP00000027683	Chromodomain helicase DNA binding protein 4a.	Uncharacterized protein.	0.420
LOC102291041	ttf2	ENSHBUP00000016597	ENSHBUP00000023019	Chromodomain helicase DNA binding protein 4a.	Transcription termination factor, RNA polymerase II.	0.429
LOC102299406	btaf1	ENSHBUP00000028559	ENSHBUP00000002927	RAD54 like 2.	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.	0.440
LOC102299406	smarcad1	ENSHBUP00000028559	ENSHBUP00000027683	RAD54 like 2.	Uncharacterized protein.	0.441
LOC102299406	ttf2	ENSHBUP00000028559	ENSHBUP00000023019	RAD54 like 2.	Transcription termination factor, RNA polymerase II.	0.442
LOC102303826	LOC102291041	ENSHBUP00000004080	ENSHBUP00000016597	Uncharacterized protein.	Chromodomain helicase DNA binding protein 4a.	0.435
LOC102303826	LOC102308233	ENSHBUP00000004080	ENSHBUP00000029969	Uncharacterized protein.	Chromodomain helicase DNA binding protein 6.	0.413