STRINGSTRING
LOC102291889 LOC102291889 usp49 usp49 ENSHBUP00000006653 ENSHBUP00000006653 usp3 usp3 usp5 usp5 LOC102314523 LOC102314523 hdac6 hdac6 usp16 usp16 usp39 usp39 usp20 usp20 usp33 usp33 brap brap usp45 usp45 usp13 usp13
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102291889Ubiquitin carboxyl-terminal hydrolase. (510 aa)
usp49Ubiquitin carboxyl-terminal hydrolase. (742 aa)
ENSHBUP00000006653UBP-type domain-containing protein. (50 aa)
usp3Ubiquitin carboxyl-terminal hydrolase. (487 aa)
usp5Ubiquitin carboxyl-terminal hydrolase. (861 aa)
LOC102314523Ubiquitin carboxyl-terminal hydrolase. (506 aa)
hdac6Histone deacetylase 6. (1102 aa)
usp16Ubiquitin carboxyl-terminal hydrolase 16; Specifically deubiquitinates 'Lys-120' of histone H2A (H2AK119Ub), a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Deubiquitination of histone H2A is a prerequisite for subsequent phosphorylation at 'Ser-11' of histone H3 (H3S10ph), and is required for chromosome segregation when cells enter into mitosis. Regulates Hox gene expression via histone H2A deubiquitination. Prefers nucleosomal substrates. Does not deubiquitinate histone H2B. (844 aa)
usp39Ubiquitin specific peptidase 39. (500 aa)
usp20Ubiquitin carboxyl-terminal hydrolase. (942 aa)
usp33Ubiquitin carboxyl-terminal hydrolase. (915 aa)
brapBRCA1 associated protein. (595 aa)
usp45Ubiquitin carboxyl-terminal hydrolase. (809 aa)
usp13Ubiquitinyl hydrolase 1. (878 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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