(21 nodes) Keratin, type I network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102292943	Keratin 97; Belongs to the intermediate filament family. (502 aa)
	prph	Peripherin; Belongs to the intermediate filament family. (492 aa)
	LOC102292551	Keratin 18a, tandem duplicate 1; Belongs to the intermediate filament family. (436 aa)
	LOC102292236	Keratin 18a, tandem duplicate 2; Belongs to the intermediate filament family. (433 aa)
	bfsp2	Beaded filament structural protein 2, phakinin; Belongs to the intermediate filament family. (432 aa)
	nefh	IF rod domain-containing protein; Belongs to the intermediate filament family. (708 aa)
	vim	Vimentin like; Belongs to the intermediate filament family. (455 aa)
	LOC102311807	Keratin, type 1, gene c5; Belongs to the intermediate filament family. (425 aa)
	LOC102310829	IF rod domain-containing protein; Belongs to the intermediate filament family. (517 aa)
	LOC102292148	IF rod domain-containing protein; Belongs to the intermediate filament family. (434 aa)
	LOC102304960	IF rod domain-containing protein; Belongs to the intermediate filament family. (411 aa)
	LOC102304657	IF rod domain-containing protein; Belongs to the intermediate filament family. (451 aa)
	LOC102307953	Keratin 98; Belongs to the intermediate filament family. (438 aa)
	LOC102307626	Si:ch211-156l18.7; Belongs to the intermediate filament family. (409 aa)
	LOC102299158	IF rod domain-containing protein; Belongs to the intermediate filament family. (450 aa)
	LOC102302333	Internexin neuronal intermediate filament protein, alpha b; Belongs to the intermediate filament family. (481 aa)
	krt18	Keratin 18b; Belongs to the intermediate filament family. (410 aa)
	LOC102292455	IF rod domain-containing protein; Belongs to the intermediate filament family. (428 aa)
	LOC102302791	Si:ch211-243g18.2; Belongs to the intermediate filament family. (427 aa)
	LOC102308480	Keratin 15; Belongs to the intermediate filament family. (450 aa)
	nefm	Neurofilament, medium polypeptide a; Belongs to the intermediate filament family. (949 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102299158	prph	ENSHBUP00000017818	ENSHBUP00000003329	IF rod domain-containing protein; Belongs to the intermediate filament family.	Peripherin; Belongs to the intermediate filament family.	0.755
LOC102302333	prph	ENSHBUP00000018125	ENSHBUP00000003329	Internexin neuronal intermediate filament protein, alpha b; Belongs to the intermediate filament family.	Peripherin; Belongs to the intermediate filament family.	0.761
nefh	prph	ENSHBUP00000008549	ENSHBUP00000003329	IF rod domain-containing protein; Belongs to the intermediate filament family.	Peripherin; Belongs to the intermediate filament family.	0.672
nefm	prph	ENSHBUP00000035504	ENSHBUP00000003329	Neurofilament, medium polypeptide a; Belongs to the intermediate filament family.	Peripherin; Belongs to the intermediate filament family.	0.755
prph	LOC102299158	ENSHBUP00000003329	ENSHBUP00000017818	Peripherin; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.755
prph	LOC102302333	ENSHBUP00000003329	ENSHBUP00000018125	Peripherin; Belongs to the intermediate filament family.	Internexin neuronal intermediate filament protein, alpha b; Belongs to the intermediate filament family.	0.761
prph	nefh	ENSHBUP00000003329	ENSHBUP00000008549	Peripherin; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.672
prph	nefm	ENSHBUP00000003329	ENSHBUP00000035504	Peripherin; Belongs to the intermediate filament family.	Neurofilament, medium polypeptide a; Belongs to the intermediate filament family.	0.755