(45 nodes) Rab-GAP-TBC domain superfamily network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tbc1d22a	TBC1 domain family, member 22a. (551 aa)
	evi5l	Si:ch211-239f4.1. (856 aa)
	tbc1d8b	TBC1 domain family member 8B. (1130 aa)
	tbc1d25	TBC1 domain family, member 25. (867 aa)
	tbc1d9b	TBC1 domain family, member 9 (with GRAM domain). (1214 aa)
	tbc1d5	TBC1 domain family, member 5. (747 aa)
	tbc1d10a	TBC1 domain family, member 10Aa. (509 aa)
	tbck	TBC1 domain containing kinase. (888 aa)
	tbc1d2b	TBC1 domain family, member 2B. (958 aa)
	LOC102297199	Si:dkey-238d18.4. (375 aa)
	tbc1d23	TBC1 domain family, member 23. (696 aa)
	TBC1D13	TBC1 domain family member 13. (400 aa)
	LOC102313620	Si:dkeyp-19e1.3. (818 aa)
	evi5	Ecotropic viral integration site 5b. (832 aa)
	tbc1d9	TBC1 domain family, member 9 (with GRAM domain). (1280 aa)
	tbc1d10b	TBC1 domain family, member 10b. (337 aa)
	sgsm3	Small G protein signaling modulator 3. (696 aa)
	tbc1d15	TBC1 domain family, member 15. (659 aa)
	sgsm2	Small G protein signaling modulator 2. (1068 aa)
	LOC102297981	Si:ch211-288d18.1. (589 aa)
	LOC102293803	Rab-GAP TBC domain-containing protein. (842 aa)
	ENSHBUP00000002760	Uncharacterized protein. (495 aa)
	ENSHBUP00000001650	Rab-GAP TBC domain-containing protein. (366 aa)
	GRTP1	Growth hormone regulated TBC protein 1b. (351 aa)
	tbc1d17	TBC1 domain family, member 17. (628 aa)
	tbc1d31	TBC1 domain family, member 31. (1050 aa)
	TBC1D14	TBC1 domain family member 14. (617 aa)
	tbc1d10c	Rab-GAP TBC domain-containing protein. (475 aa)
	tbc1d16	TBC1 domain family, member 16. (763 aa)
	TBC1D8	TBC1 domain family member 8. (1088 aa)
	tbc1d24	TBC1 domain family, member 24. (571 aa)
	RABGAP1L	RAB GTPase activating protein 1 like. (1037 aa)
	LOC102309502	Zgc:63863. (409 aa)
	LOC102288704	Small G protein signaling modulator 1b. (1292 aa)
	tbc1d19	TBC1 domain family, member 19. (525 aa)
	LOC102293117	TBC1 domain family, member 10Ab. (475 aa)
	tbc1d7	TBC1 domain family, member 7. (316 aa)
	tbc1d20	TBC1 domain family, member 20. (425 aa)
	tbc1d4	TBC1 domain family, member 4. (1251 aa)
	sgsm1	Small G protein signaling modulator 1a. (1263 aa)
	ENSHBUP00000024792	TBC1 domain family, member 22B. (417 aa)
	tbc1d30	TBC1 domain family, member 30. (1137 aa)
	LOC102308231	Growth hormone regulated TBC protein 1b. (349 aa)
	usp6nl	USP6 N-terminal like. (896 aa)
	rabgap1	RAB GTPase activating protein 1. (1092 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000001650	tbc1d16	ENSHBUP00000001650	ENSHBUP00000028544	Rab-GAP TBC domain-containing protein.	TBC1 domain family, member 16.	0.410
ENSHBUP00000002760	TBC1D13	ENSHBUP00000002760	ENSHBUP00000011163	Uncharacterized protein.	TBC1 domain family member 13.	0.424
ENSHBUP00000024792	LOC102309502	ENSHBUP00000024792	ENSHBUP00000032679	TBC1 domain family, member 22B.	Zgc:63863.	0.436
ENSHBUP00000024792	tbc1d20	ENSHBUP00000024792	ENSHBUP00000025885	TBC1 domain family, member 22B.	TBC1 domain family, member 20.	0.436
ENSHBUP00000024792	tbc1d5	ENSHBUP00000024792	ENSHBUP00000015585	TBC1 domain family, member 22B.	TBC1 domain family, member 5.	0.508
LOC102293117	TBC1D13	ENSHBUP00000033836	ENSHBUP00000011163	TBC1 domain family, member 10Ab.	TBC1 domain family member 13.	0.403
LOC102293803	tbc1d19	ENSHBUP00000003410	ENSHBUP00000033391	Rab-GAP TBC domain-containing protein.	TBC1 domain family, member 19.	0.412
LOC102293803	tbc1d23	ENSHBUP00000003410	ENSHBUP00000011559	Rab-GAP TBC domain-containing protein.	TBC1 domain family, member 23.	0.434
LOC102309502	ENSHBUP00000024792	ENSHBUP00000032679	ENSHBUP00000024792	Zgc:63863.	TBC1 domain family, member 22B.	0.436
LOC102309502	tbc1d16	ENSHBUP00000032679	ENSHBUP00000028544	Zgc:63863.	TBC1 domain family, member 16.	0.450
LOC102309502	tbc1d22a	ENSHBUP00000032679	ENSHBUP00000023165	Zgc:63863.	TBC1 domain family, member 22a.	0.436
LOC102309502	tbc1d23	ENSHBUP00000032679	ENSHBUP00000011559	Zgc:63863.	TBC1 domain family, member 23.	0.438
LOC102309502	tbc1d5	ENSHBUP00000032679	ENSHBUP00000015585	Zgc:63863.	TBC1 domain family, member 5.	0.506
LOC102309502	tbc1d7	ENSHBUP00000032679	ENSHBUP00000035027	Zgc:63863.	TBC1 domain family, member 7.	0.430
TBC1D13	ENSHBUP00000002760	ENSHBUP00000011163	ENSHBUP00000002760	TBC1 domain family member 13.	Uncharacterized protein.	0.424
TBC1D13	LOC102293117	ENSHBUP00000011163	ENSHBUP00000033836	TBC1 domain family member 13.	TBC1 domain family, member 10Ab.	0.403
TBC1D13	TBC1D8	ENSHBUP00000011163	ENSHBUP00000028676	TBC1 domain family member 13.	TBC1 domain family member 8.	0.402
TBC1D13	evi5	ENSHBUP00000011163	ENSHBUP00000010210	TBC1 domain family member 13.	Ecotropic viral integration site 5b.	0.438
TBC1D13	evi5l	ENSHBUP00000011163	ENSHBUP00000023076	TBC1 domain family member 13.	Si:ch211-239f4.1.	0.438
TBC1D13	sgsm3	ENSHBUP00000011163	ENSHBUP00000006388	TBC1 domain family member 13.	Small G protein signaling modulator 3.	0.430