17 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mysm1	Myb-like, SWIRM and MPN domains 1. (857 aa)
	eif3f	Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (269 aa)
	COPS6	COP9 signalosome subunit 6. (346 aa)
	eif3h	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (323 aa)
	ENSHBUP00000011390	BRCA1/BRCA2-containing complex, subunit 3. (266 aa)
	prpf8	Pre-mRNA processing factor 8. (2333 aa)
	emc8	ER membrane protein complex subunit 8. (204 aa)
	abraxas2	Abraxas 2, BRISC complex subunit. (453 aa)
	cops5	COP9 signalosome subunit 5. (334 aa)
	stambpl1	STAM binding protein-like 1. (418 aa)
	nploc4	NPL4 homolog, ubiquitin recognition factor. (624 aa)
	mpnd	MPN domain containing. (454 aa)
	psmd14	Proteasome 26S subunit, non-ATPase 14. (310 aa)
	abraxas1	Abraxas 1, BRCA1 A complex subunit. (346 aa)
	psmd7	Proteasome 26S subunit, non-ATPase 7. (332 aa)
	emc9	ER membrane protein complex subunit 9. (205 aa)
	stambp	STAM binding protein b. (432 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COPS6	cops5	ENSHBUP00000025144	ENSHBUP00000017010	COP9 signalosome subunit 6.	COP9 signalosome subunit 5.	0.998
COPS6	eif3f	ENSHBUP00000025144	ENSHBUP00000006818	COP9 signalosome subunit 6.	Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.485
COPS6	eif3h	ENSHBUP00000025144	ENSHBUP00000011017	COP9 signalosome subunit 6.	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.895
COPS6	mpnd	ENSHBUP00000025144	ENSHBUP00000023665	COP9 signalosome subunit 6.	MPN domain containing.	0.401
COPS6	mysm1	ENSHBUP00000025144	ENSHBUP00000031738	COP9 signalosome subunit 6.	Myb-like, SWIRM and MPN domains 1.	0.578
COPS6	psmd14	ENSHBUP00000025144	ENSHBUP00000023812	COP9 signalosome subunit 6.	Proteasome 26S subunit, non-ATPase 14.	0.583
COPS6	psmd7	ENSHBUP00000025144	ENSHBUP00000027105	COP9 signalosome subunit 6.	Proteasome 26S subunit, non-ATPase 7.	0.500
ENSHBUP00000011390	abraxas1	ENSHBUP00000011390	ENSHBUP00000000823	BRCA1/BRCA2-containing complex, subunit 3.	Abraxas 1, BRCA1 A complex subunit.	0.696
ENSHBUP00000011390	abraxas2	ENSHBUP00000011390	ENSHBUP00000015087	BRCA1/BRCA2-containing complex, subunit 3.	Abraxas 2, BRISC complex subunit.	0.992
ENSHBUP00000011390	cops5	ENSHBUP00000011390	ENSHBUP00000017010	BRCA1/BRCA2-containing complex, subunit 3.	COP9 signalosome subunit 5.	0.447
ENSHBUP00000011390	eif3h	ENSHBUP00000011390	ENSHBUP00000011017	BRCA1/BRCA2-containing complex, subunit 3.	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.869
ENSHBUP00000011390	nploc4	ENSHBUP00000011390	ENSHBUP00000022557	BRCA1/BRCA2-containing complex, subunit 3.	NPL4 homolog, ubiquitin recognition factor.	0.560
ENSHBUP00000011390	psmd7	ENSHBUP00000011390	ENSHBUP00000027105	BRCA1/BRCA2-containing complex, subunit 3.	Proteasome 26S subunit, non-ATPase 7.	0.989
abraxas1	ENSHBUP00000011390	ENSHBUP00000000823	ENSHBUP00000011390	Abraxas 1, BRCA1 A complex subunit.	BRCA1/BRCA2-containing complex, subunit 3.	0.696
abraxas1	mysm1	ENSHBUP00000000823	ENSHBUP00000031738	Abraxas 1, BRCA1 A complex subunit.	Myb-like, SWIRM and MPN domains 1.	0.466
abraxas2	ENSHBUP00000011390	ENSHBUP00000015087	ENSHBUP00000011390	Abraxas 2, BRISC complex subunit.	BRCA1/BRCA2-containing complex, subunit 3.	0.992
abraxas2	cops5	ENSHBUP00000015087	ENSHBUP00000017010	Abraxas 2, BRISC complex subunit.	COP9 signalosome subunit 5.	0.401
abraxas2	mpnd	ENSHBUP00000015087	ENSHBUP00000023665	Abraxas 2, BRISC complex subunit.	MPN domain containing.	0.444
abraxas2	mysm1	ENSHBUP00000015087	ENSHBUP00000031738	Abraxas 2, BRISC complex subunit.	Myb-like, SWIRM and MPN domains 1.	0.485
abraxas2	psmd14	ENSHBUP00000015087	ENSHBUP00000023812	Abraxas 2, BRISC complex subunit.	Proteasome 26S subunit, non-ATPase 14.	0.541