98 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSHBUP00000030614	Uncharacterized protein. (95 aa)
	psme2	Proteasome activator subunit 2. (245 aa)
	ikbkb	Inhibitor of nuclear factor kappa B kinase subunit beta. (740 aa)
	KRAS	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (217 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (440 aa)
	LOC102313910	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (315 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	psma2	Proteasome endopeptidase complex. (164 aa)
	ENSHBUP00000027516	BCL10 immune signaling adaptor. (248 aa)
	LOC102301120	Proteasome subunit beta. (275 aa)
	LOC102292281	Nuclear factor of activated T cells 5a. (1419 aa)
	psmd7	Proteasome 26S subunit, non-ATPase 7. (332 aa)
	psmd8	Proteasome 26S subunit, non-ATPase 8. (265 aa)
	fbxw11	F-box and WD repeat domain containing 11a. (562 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	psmd5	Proteasome 26S subunit, non-ATPase 5. (504 aa)
	psma5	Proteasome subunit alpha type. (241 aa)
	psmd1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (957 aa)
	psme3	Proteasome activator subunit 3. (256 aa)
	psmc4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
	rel	V-rel avian reticuloendotheliosis viral oncogene homolog. (622 aa)
	psma8	Proteasome subunit alpha type. (296 aa)
	psmd14	Proteasome 26S subunit, non-ATPase 14. (310 aa)
	LOC102313157	Proteasome subunit beta. (275 aa)
	LOC102291079	RHD domain-containing protein. (884 aa)
	psmd10	Proteasome 26S subunit, non-ATPase 10. (226 aa)
	psmb2	Proteasome subunit beta. (229 aa)
	psmb3	Proteasome subunit beta. (205 aa)
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (330 aa)
	LOC102306295	Proteasome subunit alpha type. (246 aa)
	nfatc3	Nuclear factor of activated T cells 3a. (1098 aa)
	ubb	Ubiquitin-like domain-containing protein. (54 aa)
	skp1	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
	LOC102295674	Proteasome 26S subunit, non-ATPase 4a. (377 aa)
	LOC102297042	Peptidylprolyl isomerase. (108 aa)
	LOC102307929	Proteasome activator subunit 4b. (1804 aa)
	LOC102297529	Nuclear factor of activated T cells 3b. (891 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (922 aa)
	LOC102307400	Zgc:55558. (187 aa)
	cul1	Cullin 1b; Belongs to the cullin family. (740 aa)
	nfatc1	Nuclear factor of activated T cells 1. (868 aa)
	psmb1	Proteasome subunit beta. (237 aa)
	psmc3	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (476 aa)
	psma1	Proteasome subunit alpha type. (263 aa)
	psmc2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (442 aa)
	psma6	Proteasome subunit alpha type. (246 aa)
	nfkbia	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (318 aa)
	fkbp1b	Peptidylprolyl isomerase. (108 aa)
	LOC102300610	MALT paracaspase 3. (548 aa)
	psmd12	Proteasome 26S subunit, non-ATPase 12. (456 aa)
	LOC102309023	Nuclear factor of activated T cells 5b. (1280 aa)
	LOC102314202	Proteasome subunit alpha type. (246 aa)
	ENSHBUP00000010708	Rpn3_C domain-containing protein. (104 aa)
	LOC102311902	Peptidylprolyl isomerase. (109 aa)
	LOC102299877	Proteasome subunit beta. (275 aa)
	LOC102300798	Proteasome subunit beta 12. (226 aa)
	LOC102300494	Proteasome subunit beta. (216 aa)
	rela	V-rel avian reticuloendotheliosis viral oncogene homolog A. (611 aa)
	ENSHBUP00000008412	DDE_Tnp_1_7 domain-containing protein. (441 aa)
	PSMD11	PCI domain-containing protein. (422 aa)
	psme4	Proteasome activator subunit 4a. (1811 aa)
	psma4	Proteasome subunit alpha type. (261 aa)
	LOC102303514	MALT paracaspase 2. (801 aa)
	psmf1	Proteasome inhibitor subunit 1. (277 aa)
	psmd9	Proteasome 26S subunit, non-ATPase 9. (212 aa)
	LOC102289461	Proteasome subunit beta. (278 aa)
	LOC102297353	Nuclear factor of activated T cells 2a. (895 aa)
	LOC102297700	MALT paracaspase 1. (828 aa)
	LOC102289587	DDE_Tnp_1_7 domain-containing protein. (578 aa)
	LOC102296354	Proteasome subunit beta. (286 aa)
	LOC102296372	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. (524 aa)
	ENSHBUP00000004642	Uncharacterized protein. (257 aa)
	LOC102305723	Proteasome 26S subunit, non-ATPase 11b. (422 aa)
	LOC102305679	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
	LOC102313461	Proteasome subunit beta. (304 aa)
	LOC102290159	Serine/threonine-protein phosphatase. (522 aa)
	LOC102302267	Proteasome 26S subunit, non-ATPase 4b. (375 aa)
	NFATC1	Nuclear factor of activated T cells 1. (931 aa)
	psmd6	Proteasome 26S subunit, non-ATPase 6. (389 aa)
	LOC102298787	Protein kinase domain-containing protein. (684 aa)
	LOC102305606	Proteasome subunit beta. (281 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	ENSHBUP00000002040	Proteasome subunit beta. (299 aa)
	psma3	Proteasome subunit alpha type. (255 aa)
	ENSHBUP00000000803	Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b. (144 aa)
	LOC102312674	Serine/threonine-protein phosphatase. (648 aa)
	LOC102314666	Ubiquitin-like domain-containing protein. (131 aa)
	pafah1b1	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
	card11	Caspase recruitment domain family, member 11. (1162 aa)
	psmb4	Proteasome subunit beta; Belongs to the peptidase T1B family. (259 aa)
	nfkbie	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon. (345 aa)
	wdr92	WD repeat domain 92. (358 aa)
	ppp3r1	Uncharacterized protein. (174 aa)
	psmd13	Proteasome 26S subunit, non-ATPase 13. (378 aa)
	psme1	Proteasome activator subunit 1. (230 aa)
	LOC102311796	Component of inhibitor of nuclear factor kappa B kinase complex. (734 aa)
	LOC102307191	Proteasome subunit beta11b. (362 aa)
	psmc5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (448 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	LOC102313910	ENSHBUP00000018081	ENSHBUP00000028886	Cold shock domain containing E1, RNA-binding.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.495
CSDE1	LOC102314666	ENSHBUP00000018081	ENSHBUP00000031002	Cold shock domain containing E1, RNA-binding.	Ubiquitin-like domain-containing protein.	0.689
CSDE1	cul1	ENSHBUP00000018081	ENSHBUP00000017087	Cold shock domain containing E1, RNA-binding.	Cullin 1b; Belongs to the cullin family.	0.411
CSDE1	nfkbia	ENSHBUP00000018081	ENSHBUP00000014667	Cold shock domain containing E1, RNA-binding.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.495
CSDE1	nfkbie	ENSHBUP00000018081	ENSHBUP00000032184	Cold shock domain containing E1, RNA-binding.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon.	0.481
CSDE1	rel	ENSHBUP00000018081	ENSHBUP00000023868	Cold shock domain containing E1, RNA-binding.	V-rel avian reticuloendotheliosis viral oncogene homolog.	0.416
CSDE1	rela	ENSHBUP00000018081	ENSHBUP00000008793	Cold shock domain containing E1, RNA-binding.	V-rel avian reticuloendotheliosis viral oncogene homolog A.	0.416
CSDE1	rps27a	ENSHBUP00000018081	ENSHBUP00000002167	Cold shock domain containing E1, RNA-binding.	Ribosomal protein S27a.	0.674
CSDE1	uba52	ENSHBUP00000018081	ENSHBUP00000026409	Cold shock domain containing E1, RNA-binding.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.629
CSDE1	ubb	ENSHBUP00000018081	ENSHBUP00000019517	Cold shock domain containing E1, RNA-binding.	Ubiquitin-like domain-containing protein.	0.629
ENSHBUP00000000803	LOC102290159	ENSHBUP00000000803	ENSHBUP00000003386	Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.	Serine/threonine-protein phosphatase.	0.954
ENSHBUP00000000803	LOC102291079	ENSHBUP00000000803	ENSHBUP00000022984	Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.	RHD domain-containing protein.	0.883
ENSHBUP00000000803	LOC102297042	ENSHBUP00000000803	ENSHBUP00000018904	Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.	Peptidylprolyl isomerase.	0.828
ENSHBUP00000000803	LOC102297353	ENSHBUP00000000803	ENSHBUP00000006011	Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.	Nuclear factor of activated T cells 2a.	0.911
ENSHBUP00000000803	LOC102297529	ENSHBUP00000000803	ENSHBUP00000018104	Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.	Nuclear factor of activated T cells 3b.	0.903
ENSHBUP00000000803	LOC102311902	ENSHBUP00000000803	ENSHBUP00000009490	Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.	Peptidylprolyl isomerase.	0.828
ENSHBUP00000000803	LOC102312674	ENSHBUP00000000803	ENSHBUP00000000522	Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.	Serine/threonine-protein phosphatase.	0.954
ENSHBUP00000000803	LOC102314666	ENSHBUP00000000803	ENSHBUP00000031002	Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.	Ubiquitin-like domain-containing protein.	0.400
ENSHBUP00000000803	NFATC1	ENSHBUP00000000803	ENSHBUP00000003223	Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.	Nuclear factor of activated T cells 1.	0.975
ENSHBUP00000000803	card11	ENSHBUP00000000803	ENSHBUP00000029683	Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.	Caspase recruitment domain family, member 11.	0.414