49 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	trim13	Tripartite motif containing 13. (414 aa)
	LOC102296372	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. (524 aa)
	dhx29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1366 aa)
	nfkb2	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100). (902 aa)
	rela	V-rel avian reticuloendotheliosis viral oncogene homolog A. (611 aa)
	DDX41	DEAD-box helicase 41. (614 aa)
	nfkbia	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (318 aa)
	LOC102291906	Mab-21 domain-containing protein. (516 aa)
	LOC102293506	Im:7160594. (454 aa)
	ep300	E1A binding protein p300 b. (2764 aa)
	nkiras1	NFKB inhibitor interacting Ras-like 1. (230 aa)
	ythdc1	YTH domain containing 1. (683 aa)
	LOC102291632	Signal transducer and activator of transcription. (786 aa)
	ubb	Ubiquitin-like domain-containing protein. (54 aa)
	nhlrc4	Tripartite motif containing 32. (693 aa)
	LOC102306757	E1A binding protein p300 a. (2600 aa)
	LOC102301098	Uncharacterized protein. (768 aa)
	LOC102295012	Uncharacterized protein. (1644 aa)
	LOC102309899	Signal transducer and activator of transcription. (786 aa)
	LOC102311534	Deltex 4, E3 ubiquitin ligase a. (776 aa)
	dhx9	DEAH (Asp-Glu-Ala-His) box helicase 9. (1271 aa)
	rel	V-rel avian reticuloendotheliosis viral oncogene homolog. (622 aa)
	dhx30	DEAH (Asp-Glu-Ala-His) box helicase 30. (1157 aa)
	YTHDC2	YTH domain containing 2. (1207 aa)
	LOC102293257	Uncharacterized protein. (2253 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	lrrfip2	Leucine rich repeat (in FLII) interacting protein 2. (444 aa)
	LOC102313910	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (315 aa)
	ikbkb	Inhibitor of nuclear factor kappa B kinase subunit beta. (740 aa)
	LOC102313362	Uncharacterized protein. (621 aa)
	dhx36	DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1063 aa)
	LOC102300281	TANK-binding kinase 1. (723 aa)
	LOC102306633	CREB binding protein a. (2475 aa)
	myd88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (288 aa)
	LOC102314666	Ubiquitin-like domain-containing protein. (131 aa)
	LOC102314091	Im:7160594. (488 aa)
	irf7	Interferon regulatory factor 7. (452 aa)
	mre11	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (695 aa)
	mfsd1	Major facilitator superfamily domain containing 1. (516 aa)
	ctnnb1	Catenin (cadherin-associated protein), beta 1. (783 aa)
	LOC102311796	Component of inhibitor of nuclear factor kappa B kinase complex. (734 aa)
	LOC102293505	Interferon regulatory factor 3. (465 aa)
	sting1	Transmembrane protein 173. (396 aa)
	nkiras2	NFKB inhibitor interacting Ras-like 2. (192 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	LOC102298787	Protein kinase domain-containing protein. (684 aa)
	nfkb1	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1. (907 aa)
	dhx57	DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57. (1435 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX41	LOC102291906	ENSHBUP00000009406	ENSHBUP00000015157	DEAD-box helicase 41.	Mab-21 domain-containing protein.	0.540
DDX41	LOC102293505	ENSHBUP00000009406	ENSHBUP00000032680	DEAD-box helicase 41.	Interferon regulatory factor 3.	0.610
DDX41	LOC102300281	ENSHBUP00000009406	ENSHBUP00000030587	DEAD-box helicase 41.	TANK-binding kinase 1.	0.574
DDX41	LOC102314666	ENSHBUP00000009406	ENSHBUP00000031002	DEAD-box helicase 41.	Ubiquitin-like domain-containing protein.	0.654
DDX41	YTHDC2	ENSHBUP00000009406	ENSHBUP00000025445	DEAD-box helicase 41.	YTH domain containing 2.	0.662
DDX41	dhx29	ENSHBUP00000009406	ENSHBUP00000004962	DEAD-box helicase 41.	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	0.721
DDX41	dhx30	ENSHBUP00000009406	ENSHBUP00000024577	DEAD-box helicase 41.	DEAH (Asp-Glu-Ala-His) box helicase 30.	0.682
DDX41	dhx36	ENSHBUP00000009406	ENSHBUP00000030225	DEAD-box helicase 41.	DEAH (Asp-Glu-Ala-His) box polypeptide 36.	0.766
DDX41	dhx57	ENSHBUP00000009406	ENSHBUP00000003624	DEAD-box helicase 41.	DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57.	0.664
DDX41	dhx9	ENSHBUP00000009406	ENSHBUP00000023365	DEAD-box helicase 41.	DEAH (Asp-Glu-Ala-His) box helicase 9.	0.797
DDX41	irf7	ENSHBUP00000009406	ENSHBUP00000031613	DEAD-box helicase 41.	Interferon regulatory factor 7.	0.468
DDX41	nhlrc4	ENSHBUP00000009406	ENSHBUP00000019803	DEAD-box helicase 41.	Tripartite motif containing 32.	0.488
DDX41	sting1	ENSHBUP00000009406	ENSHBUP00000000547	DEAD-box helicase 41.	Transmembrane protein 173.	0.709
DDX41	trim13	ENSHBUP00000009406	ENSHBUP00000004688	DEAD-box helicase 41.	Tripartite motif containing 13.	0.428
LOC102291632	LOC102293257	ENSHBUP00000018183	ENSHBUP00000025589	Signal transducer and activator of transcription.	Uncharacterized protein.	0.806
LOC102291632	LOC102298787	ENSHBUP00000018183	ENSHBUP00000002722	Signal transducer and activator of transcription.	Protein kinase domain-containing protein.	0.590
LOC102291632	LOC102300281	ENSHBUP00000018183	ENSHBUP00000030587	Signal transducer and activator of transcription.	TANK-binding kinase 1.	0.743
LOC102291632	LOC102306633	ENSHBUP00000018183	ENSHBUP00000030717	Signal transducer and activator of transcription.	CREB binding protein a.	0.806
LOC102291632	LOC102306757	ENSHBUP00000018183	ENSHBUP00000020755	Signal transducer and activator of transcription.	E1A binding protein p300 a.	0.782
LOC102291632	LOC102309899	ENSHBUP00000018183	ENSHBUP00000022033	Signal transducer and activator of transcription.	Signal transducer and activator of transcription.	0.829