STRINGSTRING
nup188 nup188 snrpd3 snrpd3 gemin7 gemin7 ENSHBUP00000001166 ENSHBUP00000001166 nup153 nup153 prmt5 prmt5 nup107 nup107 tpr tpr NUP54 NUP54 snrpg snrpg ndc1 ndc1 snupn snupn nup160 nup160 gemin4 gemin4 ENSHBUP00000007056 ENSHBUP00000007056 nup88 nup88 nup85 nup85 rae1 rae1 GEMIN8 GEMIN8 nup93 nup93 gemin5 gemin5 LOC102310114 LOC102310114 gemin2 gemin2 nup42 nup42 nup205 nup205 ENSHBUP00000016048 ENSHBUP00000016048 ENSHBUP00000016099 ENSHBUP00000016099 NUP62 NUP62 pom121 pom121 LOC102296327 LOC102296327 seh1l seh1l nup155 nup155 ranbp2 ranbp2 snrpd1 snrpd1 ENSHBUP00000022966 ENSHBUP00000022966 snrpd2 snrpd2 sec13 sec13 snrpe snrpe nup133 nup133 ddx20 ddx20 ENSHBUP00000025889 ENSHBUP00000025889 snrpb snrpb aaas aaas nup43 nup43 gemin8 gemin8 WDR77 WDR77 gemin6 gemin6 nup214 nup214 nup50 nup50 nup210 nup210 clns1a clns1a nup58 nup58
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nup188Nucleoporin 188. (1632 aa)
snrpd3Small nuclear ribonucleoprotein Sm D3. (127 aa)
gemin7Gem (nuclear organelle) associated protein 7. (128 aa)
ENSHBUP00000001166Uncharacterized protein. (102 aa)
nup153Nucleoporin 153. (1526 aa)
prmt5Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (631 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (908 aa)
tprTranslocated promoter region b, nuclear basket protein. (2192 aa)
NUP54Nucleoporin 54. (621 aa)
snrpgSmall nuclear ribonucleoprotein G. (76 aa)
ndc1NDC1 transmembrane nucleoporin. (663 aa)
snupnSnurportin 1. (373 aa)
nup160Nucleoporin 160. (1289 aa)
gemin4Gem (nuclear organelle) associated protein 4. (1114 aa)
ENSHBUP00000007056Nucleoporin 37. (313 aa)
nup88Nucleoporin 88. (719 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (540 aa)
rae1Ribonucleic acid export 1. (369 aa)
GEMIN8Gem nuclear organelle associated protein 8. (185 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
gemin5Gem (nuclear organelle) associated protein 5. (1466 aa)
LOC102310114Survival of motor neuron 1, telomeric. (290 aa)
gemin2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (266 aa)
nup42Nucleoporin 42. (488 aa)
nup205Nucleoporin 205. (1934 aa)
ENSHBUP00000016048Uncharacterized protein. (505 aa)
ENSHBUP00000016099Peptidase S59 domain-containing protein. (193 aa)
NUP62Nucleoporin 62. (562 aa)
pom121POM121 transmembrane nucleoporin. (1177 aa)
LOC102296327Translocated promoter region a, nuclear basket protein. (1747 aa)
seh1lSEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (351 aa)
nup155Nucleoporin 155. (1365 aa)
ranbp2RAN binding protein 2. (3058 aa)
snrpd1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (205 aa)
ENSHBUP00000022966LYN proto-oncogene, Src family tyrosine kinase. (578 aa)
snrpd2Small nuclear ribonucleoprotein Sm D2. (118 aa)
sec13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (331 aa)
snrpeSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (103 aa)
nup133Nucleoporin 133. (1135 aa)
ddx20DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. (792 aa)
ENSHBUP00000025889Sm domain-containing protein. (60 aa)
snrpbSmall nuclear ribonucleoprotein-associated protein. (262 aa)
aaasAchalasia, adrenocortical insufficiency, alacrimia. (520 aa)
nup43Nucleoporin 43. (372 aa)
gemin8Gem (nuclear organelle) associated protein 8. (226 aa)
WDR77WD repeat domain 77. (337 aa)
gemin6Gem (nuclear organelle) associated protein 6. (169 aa)
nup214Uncharacterized protein. (1830 aa)
nup50Nucleoporin 50. (469 aa)
nup210Nucleoporin 210. (1884 aa)
clns1aChloride channel, nucleotide-sensitive, 1A. (230 aa)
nup58Nucleoporin 58. (599 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.