STRINGSTRING
rps27a rps27a traf6 traf6 ngfr ngfr prkci prkci nfkbia nfkbia sqstm1 sqstm1 irak1 irak1 ubb ubb LOC102293948 LOC102293948 ENSHBUP00000024930 ENSHBUP00000024930 uba52 uba52 LOC102312478 LOC102312478 LOC102313910 LOC102313910 ikbkb ikbkb myd88 myd88 LOC102314666 LOC102314666 ripk2 ripk2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps27aRibosomal protein S27a. (156 aa)
traf6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (571 aa)
ngfrNerve growth factor receptor a (TNFR superfamily, member 16). (357 aa)
prkciProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (542 aa)
nfkbiaNuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (318 aa)
sqstm1Sequestosome 1. (426 aa)
irak1Interleukin-1 receptor-associated kinase 1. (726 aa)
ubbUbiquitin-like domain-containing protein. (54 aa)
LOC102293948Nerve growth factor receptor b. (429 aa)
ENSHBUP00000024930Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family. (147 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC102312478Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family. (202 aa)
LOC102313910Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (315 aa)
ikbkbInhibitor of nuclear factor kappa B kinase subunit beta. (740 aa)
myd88Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (288 aa)
LOC102314666Ubiquitin-like domain-containing protein. (131 aa)
ripk2Receptor-interacting serine-threonine kinase 2. (576 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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