STRINGSTRING
rps27a rps27a sqstm1 sqstm1 psenen psenen NCSTN NCSTN traf6 traf6 ngfr ngfr LOC102301248 LOC102301248 LOC102293948 LOC102293948 ENSHBUP00000024930 ENSHBUP00000024930 LOC102312478 LOC102312478 aph1a aph1a LOC102314666 LOC102314666 LOC102299462 LOC102299462
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps27aRibosomal protein S27a. (156 aa)
sqstm1Sequestosome 1. (426 aa)
psenenPresenilin enhancer, gamma-secretase subunit. (101 aa)
NCSTNNicastrin. (717 aa)
traf6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (571 aa)
ngfrNerve growth factor receptor a (TNFR superfamily, member 16). (357 aa)
LOC102301248Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (430 aa)
LOC102293948Nerve growth factor receptor b. (429 aa)
ENSHBUP00000024930Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family. (147 aa)
LOC102312478Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family. (202 aa)
aph1aAPH1B gamma secretase subunit. (258 aa)
LOC102314666Ubiquitin-like domain-containing protein. (131 aa)
LOC102299462Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (542 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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