STRINGSTRING
LOC102314283 LOC102314283 ubb ubb LOC102313422 LOC102313422 TGFBR2 TGFBR2 smad7 smad7 LOC102302489 LOC102302489 stub1 stub1 LOC102299619 LOC102299619 rps27a rps27a pmepa1 pmepa1 LOC102296550 LOC102296550 ldlrad4 ldlrad4 LOC102314666 LOC102314666 STUB1 STUB1 ENSHBUP00000028658 ENSHBUP00000028658 SMAD3 SMAD3 uba52 uba52 LOC102304527 LOC102304527 bambi bambi strap strap smad2 smad2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102314283Transforming growth factor beta; Belongs to the TGF-beta family. (383 aa)
ubbUbiquitin-like domain-containing protein. (54 aa)
LOC102313422Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (546 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (538 aa)
smad7Mothers against decapentaplegic homolog. (376 aa)
LOC102302489Mothers against decapentaplegic homolog. (375 aa)
stub1STIP1 homology and U-Box containing protein 1. (284 aa)
LOC102299619Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (303 aa)
rps27aRibosomal protein S27a. (156 aa)
pmepa1Prostate transmembrane protein, androgen induced 1. (324 aa)
LOC102296550Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (653 aa)
ldlrad4Low density lipoprotein receptor class A domain containing 4b. (297 aa)
LOC102314666Ubiquitin-like domain-containing protein. (131 aa)
STUB1STIP1 homology and U-box containing protein 1. (290 aa)
ENSHBUP00000028658MH1 domain-containing protein. (68 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC102304527Mothers against decapentaplegic homolog. (467 aa)
bambiBMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family. (256 aa)
strapSerine/threonine kinase receptor associated protein. (329 aa)
smad2Mothers against decapentaplegic homolog. (472 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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