58 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ccnb2	Cyclin B2; Belongs to the cyclin family. (388 aa)
	ctdspl2	CTD small phosphatase like 2. (504 aa)
	LOC102299188	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 3. (266 aa)
	LPIN2	Lipin 2. (880 aa)
	LOC102301293	Uncharacterized protein; Belongs to the intermediate filament family. (642 aa)
	nup214	Uncharacterized protein. (1830 aa)
	NEK9	NIMA related kinase 9. (962 aa)
	LOC102289032	Lipin 1. (968 aa)
	nup50	Nucleoporin 50. (469 aa)
	nup210	Nucleoporin 210. (1884 aa)
	LOC102306599	Lamin L3; Belongs to the intermediate filament family. (649 aa)
	nup58	Nucleoporin 58. (599 aa)
	nup160	Nucleoporin 160. (1289 aa)
	ENSHBUP00000007056	Nucleoporin 37. (313 aa)
	lmna	Lamin A; Belongs to the intermediate filament family. (646 aa)
	nup88	Nucleoporin 88. (719 aa)
	nup85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (540 aa)
	LOC102310315	Si:ch211-216l23.2. (424 aa)
	ENSHBUP00000000920	Emerin (Emery-Dreifuss muscular dystrophy). (151 aa)
	lmnb2	Lamin B2; Belongs to the intermediate filament family. (579 aa)
	ENSHBUP00000001166	Uncharacterized protein. (102 aa)
	ctdnep1	CTD nuclear envelope phosphatase 1b. (245 aa)
	nup153	Nucleoporin 153. (1526 aa)
	LOC102300404	FCP1 homology domain-containing protein. (478 aa)
	nup107	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (908 aa)
	tpr	Translocated promoter region b, nuclear basket protein. (2192 aa)
	NUP54	Nucleoporin 54. (621 aa)
	wdr41	WD repeat domain 41. (450 aa)
	LOC102297357	NIMA-related kinase 6; Belongs to the protein kinase superfamily. (332 aa)
	ndc1	NDC1 transmembrane nucleoporin. (663 aa)
	rae1	Ribonucleic acid export 1. (369 aa)
	nup93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
	lpin1	Si:ch73-21k16.1. (824 aa)
	cdk1	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (307 aa)
	nup42	Nucleoporin 42. (488 aa)
	nup205	Nucleoporin 205. (1934 aa)
	lemd3	LEM domain containing 3. (844 aa)
	ENSHBUP00000016048	Uncharacterized protein. (505 aa)
	ENSHBUP00000016099	Peptidase S59 domain-containing protein. (193 aa)
	nek7	NIMA-related kinase 7; Belongs to the protein kinase superfamily. (364 aa)
	NUP62	Nucleoporin 62. (562 aa)
	pom121	POM121 transmembrane nucleoporin. (1177 aa)
	LOC102296327	Translocated promoter region a, nuclear basket protein. (1747 aa)
	seh1l	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (351 aa)
	cnep1r1	CTD nuclear envelope phosphatase 1 regulatory subunit 1. (125 aa)
	nup155	Nucleoporin 155. (1365 aa)
	cntd2	Cyclin N-terminal domain containing 2; Belongs to the cyclin family. (361 aa)
	LOC102313009	Zgc:123305. (971 aa)
	ccnb3	Cyclin B3; Belongs to the cyclin family. (408 aa)
	ranbp2	RAN binding protein 2. (3058 aa)
	sec13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (331 aa)
	nup133	Nucleoporin 133. (1135 aa)
	nup188	Nucleoporin 188. (1632 aa)
	aaas	Achalasia, adrenocortical insufficiency, alacrimia. (520 aa)
	ncoa5	Nuclear receptor coactivator 5. (498 aa)
	nup43	Nucleoporin 43. (372 aa)
	ccnb1	Cyclin B1; Belongs to the cyclin family. (402 aa)
	LOC102304908	Lipin 2. (959 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHBUP00000000920	LOC102301293	ENSHBUP00000000920	ENSHBUP00000031930	Emerin (Emery-Dreifuss muscular dystrophy).	Uncharacterized protein; Belongs to the intermediate filament family.	0.846
ENSHBUP00000000920	LOC102306599	ENSHBUP00000000920	ENSHBUP00000034765	Emerin (Emery-Dreifuss muscular dystrophy).	Lamin L3; Belongs to the intermediate filament family.	0.846
ENSHBUP00000000920	lemd3	ENSHBUP00000000920	ENSHBUP00000015770	Emerin (Emery-Dreifuss muscular dystrophy).	LEM domain containing 3.	0.850
ENSHBUP00000000920	lmna	ENSHBUP00000000920	ENSHBUP00000007890	Emerin (Emery-Dreifuss muscular dystrophy).	Lamin A; Belongs to the intermediate filament family.	0.846
ENSHBUP00000000920	lmnb2	ENSHBUP00000000920	ENSHBUP00000000926	Emerin (Emery-Dreifuss muscular dystrophy).	Lamin B2; Belongs to the intermediate filament family.	0.846
ENSHBUP00000000920	nup153	ENSHBUP00000000920	ENSHBUP00000001783	Emerin (Emery-Dreifuss muscular dystrophy).	Nucleoporin 153.	0.567
ENSHBUP00000001166	ENSHBUP00000007056	ENSHBUP00000001166	ENSHBUP00000007056	Uncharacterized protein.	Nucleoporin 37.	0.983
ENSHBUP00000001166	ENSHBUP00000016048	ENSHBUP00000001166	ENSHBUP00000016048	Uncharacterized protein.	Uncharacterized protein.	0.969
ENSHBUP00000001166	ENSHBUP00000016099	ENSHBUP00000001166	ENSHBUP00000016099	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.969
ENSHBUP00000001166	LOC102296327	ENSHBUP00000001166	ENSHBUP00000017617	Uncharacterized protein.	Translocated promoter region a, nuclear basket protein.	0.737
ENSHBUP00000001166	LOC102310315	ENSHBUP00000001166	ENSHBUP00000000501	Uncharacterized protein.	Si:ch211-216l23.2.	0.904
ENSHBUP00000001166	NEK9	ENSHBUP00000001166	ENSHBUP00000032478	Uncharacterized protein.	NIMA related kinase 9.	0.628
ENSHBUP00000001166	NUP54	ENSHBUP00000001166	ENSHBUP00000004619	Uncharacterized protein.	Nucleoporin 54.	0.989
ENSHBUP00000001166	NUP62	ENSHBUP00000001166	ENSHBUP00000016945	Uncharacterized protein.	Nucleoporin 62.	0.970
ENSHBUP00000001166	aaas	ENSHBUP00000001166	ENSHBUP00000026302	Uncharacterized protein.	Achalasia, adrenocortical insufficiency, alacrimia.	0.981
ENSHBUP00000001166	ccnb1	ENSHBUP00000001166	ENSHBUP00000028168	Uncharacterized protein.	Cyclin B1; Belongs to the cyclin family.	0.639
ENSHBUP00000001166	ccnb2	ENSHBUP00000001166	ENSHBUP00000029195	Uncharacterized protein.	Cyclin B2; Belongs to the cyclin family.	0.645
ENSHBUP00000001166	ccnb3	ENSHBUP00000001166	ENSHBUP00000020660	Uncharacterized protein.	Cyclin B3; Belongs to the cyclin family.	0.639
ENSHBUP00000001166	cdk1	ENSHBUP00000001166	ENSHBUP00000012669	Uncharacterized protein.	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	0.626
ENSHBUP00000001166	cntd2	ENSHBUP00000001166	ENSHBUP00000020045	Uncharacterized protein.	Cyclin N-terminal domain containing 2; Belongs to the cyclin family.	0.639