12 items (Haplochromis burtoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	trim13	Tripartite motif containing 13. (414 aa)
	sting1	Transmembrane protein 173. (396 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	DDX41	DEAD-box helicase 41. (614 aa)
	ubb	Ubiquitin-like domain-containing protein. (54 aa)
	nhlrc4	Tripartite motif containing 32. (693 aa)
	LOC102301098	Uncharacterized protein. (768 aa)
	LOC102311534	Deltex 4, E3 ubiquitin ligase a. (776 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	LOC102300281	TANK-binding kinase 1. (723 aa)
	LOC102314666	Ubiquitin-like domain-containing protein. (131 aa)
	LOC102293505	Interferon regulatory factor 3. (465 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX41	LOC102293505	ENSHBUP00000009406	ENSHBUP00000032680	DEAD-box helicase 41.	Interferon regulatory factor 3.	0.610
DDX41	LOC102300281	ENSHBUP00000009406	ENSHBUP00000030587	DEAD-box helicase 41.	TANK-binding kinase 1.	0.574
DDX41	LOC102314666	ENSHBUP00000009406	ENSHBUP00000031002	DEAD-box helicase 41.	Ubiquitin-like domain-containing protein.	0.654
DDX41	nhlrc4	ENSHBUP00000009406	ENSHBUP00000019803	DEAD-box helicase 41.	Tripartite motif containing 32.	0.488
DDX41	sting1	ENSHBUP00000009406	ENSHBUP00000000547	DEAD-box helicase 41.	Transmembrane protein 173.	0.709
DDX41	trim13	ENSHBUP00000009406	ENSHBUP00000004688	DEAD-box helicase 41.	Tripartite motif containing 13.	0.428
LOC102293505	DDX41	ENSHBUP00000032680	ENSHBUP00000009406	Interferon regulatory factor 3.	DEAD-box helicase 41.	0.610
LOC102293505	LOC102300281	ENSHBUP00000032680	ENSHBUP00000030587	Interferon regulatory factor 3.	TANK-binding kinase 1.	0.988
LOC102293505	LOC102301098	ENSHBUP00000032680	ENSHBUP00000021524	Interferon regulatory factor 3.	Uncharacterized protein.	0.426
LOC102293505	LOC102311534	ENSHBUP00000032680	ENSHBUP00000022540	Interferon regulatory factor 3.	Deltex 4, E3 ubiquitin ligase a.	0.426
LOC102293505	LOC102314666	ENSHBUP00000032680	ENSHBUP00000031002	Interferon regulatory factor 3.	Ubiquitin-like domain-containing protein.	0.658
LOC102293505	nhlrc4	ENSHBUP00000032680	ENSHBUP00000019803	Interferon regulatory factor 3.	Tripartite motif containing 32.	0.420
LOC102293505	rps27a	ENSHBUP00000032680	ENSHBUP00000002167	Interferon regulatory factor 3.	Ribosomal protein S27a.	0.704
LOC102293505	sting1	ENSHBUP00000032680	ENSHBUP00000000547	Interferon regulatory factor 3.	Transmembrane protein 173.	0.984
LOC102293505	trim13	ENSHBUP00000032680	ENSHBUP00000004688	Interferon regulatory factor 3.	Tripartite motif containing 13.	0.523
LOC102300281	DDX41	ENSHBUP00000030587	ENSHBUP00000009406	TANK-binding kinase 1.	DEAD-box helicase 41.	0.574
LOC102300281	LOC102293505	ENSHBUP00000030587	ENSHBUP00000032680	TANK-binding kinase 1.	Interferon regulatory factor 3.	0.988
LOC102300281	LOC102314666	ENSHBUP00000030587	ENSHBUP00000031002	TANK-binding kinase 1.	Ubiquitin-like domain-containing protein.	0.781
LOC102300281	rps27a	ENSHBUP00000030587	ENSHBUP00000002167	TANK-binding kinase 1.	Ribosomal protein S27a.	0.749
LOC102300281	sting1	ENSHBUP00000030587	ENSHBUP00000000547	TANK-binding kinase 1.	Transmembrane protein 173.	0.987